TCONS_00047409-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047409-protein
Unique Name	TCONS_00047409-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1088

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047409-protein ID=TCONS_00047409-protein|Name=TCONS_00047409-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1088bp
MASDNAPLLNSQSDSNFDEDDYLSERNRKNYGLYSGDSSGKKKDDGCCGK
FIWCICGGCFQVCGRGFVKLFSSEPEYEPRRVRFGQKPSGNFSRNIIRNQ
KYSVITFIPLVLFHQFKYFLNLFFLCVALTQFVPSLRVGPLYAYWAPLGF
VLFVTLMKEAYDDIKRYLRDKKENAQKYKKITSNGVKTVASSDIEIGDLI
LVEKNQRVPADMIFLRTTDKTGTNFIRTDQMDGETDWKLRIAVPTCQRLP
TDEDLLHINAFVYAEKPEKDIYNFIGTFCKDNGEREDVSLNVENTLWANT
VVATGEAIGVVIYTGNETRSVMNTSYPKTKFGLLDSELNNLTKVLFCLVL
ALSLTLVCLKGFEGAWYKSLIRFTILFSYIIPISLRINLDMAKLVYSWFI
SRDDEIPDTVVRTSTIPEELGRISYLLTDKTGTLTQNEMVFKKLHLGTVS
FGQDSMDEVRTYLHSVYANPTKTESSTSKKTIKRTVVTRVYEAVKALALC
HNVTPVVDENTPRSATPEINGHIELKETGGTSDIVYQASSPDEVALVTWT
ESIGLTLIHRDLNEIHLRSPVGDTLKYRVLQVFPFTSETKRMGIIVKDLD
TGEILFYMKGADAVMQNHVNYNDWLEEECGNMAREGLRTLVVAKKSLTEE
QFQDFEYRYNQAKLSVEDRAVKVLKVEESLIYDMELLCLTGVEDKLQQDV
KPTLELLRNAGIKIWMLTGDKMETAICIAQSSRLVAKTQSIYQFKLVTNR
AEAHLELNSFRRKCDHALVIKGDSLETVIKHYEHEFMELAIQCPSVVVCR
CTPTQKADIVQLLKTHTGKRTCAIGDGGNDVSMIQMADAGIGLVGKEGKQ
ASLAADFSMTQFSHLGRLLIWHGRNSYKRSAALGQFVIHRGLIISVIQAV
FSCAFFYISVPLYHGMLQVGYSTVYTTAPVFSLVLDVDVRDDIAMTYPEL
YKDLVKGRHLSYKTFFVWLLVSIYQGGIIMFGALFLFEDDFIHIVSISFT
TLILTELIMVALSVRTWHWLMLFAEFLSLLIYVVSVVILKNEFDEQFITS
VPFYWKTLVITLVSCLPLYILKLLRKRFAPPNYSKLTE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030193	XLOC_030193	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047409	TCONS_00047409	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001757	P_typ_ATPase
IPR023299	ATPase_P-typ_cyto_domN
IPR032630	P_typ_ATPase_c
IPR032631	P-type_ATPase_N
IPR006539	P-type_ATPase_IV
IPR023214	HAD-like_dom
IPR018303	ATPase_P-typ_P_site
IPR008250	ATPase_P-typ_transduc_dom_A
IPR023298	ATPase_P-typ_TM_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0000287	magnesium ion binding
GO:0004012	phospholipid-translocating ATPase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015914	phospholipid transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015914	phospholipid transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004012	phospholipid-translocating ATPase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00119	CATATPASE	coord: 824..843 score: 41.77 coord: 710..720 score: 60.33 coord: 427..441 score: 59.72
None	No IPR available	GENE3D	2.70.150.10		coord: 140..325 e-value: 1.6E-34 score: 118.2
None	No IPR available	PFAM	PF00122	E1-E2_ATPase	coord: 174..391 e-value: 1.5E-14 score: 53.8
None	No IPR available	PFAM	PF00702	Hydrolase	coord: 426..838 e-value: 1.9E-8 score: 34.8
None	No IPR available	SFLD	SFLDF00027	p-type_atpase	coord: 410..877 e-value: 0.0 score: 275.1
None	No IPR available	SFLD	SFLDG00002	C1.7:_P-type_atpase_like	coord: 410..877 e-value: 0.0 score: 275.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
IPR001757	P-type ATPase	TIGRFAM	TIGR01494	TIGR01494	coord: 680..742 e-value: 3.4E-19 score: 66.6 coord: 797..905 e-value: 4.5E-28 score: 95.9 coord: 320..458 e-value: 1.7E-23 score: 80.8
IPR023299	P-type ATPase, cytoplasmic domain N	GENE3D	3.40.1110.10		coord: 461..688 e-value: 2.2E-46 score: 157.4 coord: 388..460 e-value: 1.6E-6 score: 26.9
IPR023299	P-type ATPase, cytoplasmic domain N	SUPERFAMILY	81660	Metal cation-transporting ATPase, ATP-binding domain N	coord: 433..695
IPR032630	P-type ATPase, C-terminal	PFAM	PF16212	PhoLip_ATPase_C	coord: 853..1080 e-value: 6.5E-50 score: 170.1
IPR032631	P-type ATPase, N-terminal	PFAM	PF16209	PhoLip_ATPase_N	coord: 89..142 e-value: 1.4E-16 score: 59.9
IPR006539	P-type ATPase, subfamily IV	TIGRFAM	TIGR01652	TIGR01652	coord: 92..1087 e-value: 3.6E-300 score: 996.3
IPR023214	HAD-like domain	GENE3D	3.40.50.1000		coord: 689..866 e-value: 1.4E-47 score: 161.1
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 416..439 coord: 639..750 coord: 798..868
IPR018303	P-type ATPase, phosphorylation site	PROSITE	PS00154	ATPASE_E1_E2	coord: 429..435
IPR008250	P-type ATPase, A domain	SUPERFAMILY	81653	Calcium ATPase, transduction domain A	coord: 177..246 coord: 284..319
IPR023298	P-type ATPase, transmembrane domain	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 873..1080 coord: 92..179 coord: 325..421

Blast

[Close]

BLAST of TCONS_00047409-protein vs. Swiss-Prot (Human)
Match: ATP9B (Probable phospholipid-transporting ATPase IIB OS=Homo sapiens GN=ATP9B PE=2 SV=4)

HSP 1 Score: 1370.14 bits (3545), Expect = 0.000e+0
Identity = 672/1115 (60.27%), Postives = 838/1115 (75.16%), Query Frame = 0

Query:    4 DNAPLLNSQSDSNFDEDDYLSERNRKNYGLYSGDSSGKKKDDGCCGKFIWCICGG----CFQVCGRGFVKLFSSEPEYEPRRVRFG--QKPSGNFSRNIIRNQKYSVITFIPLVLFHQFKYFLNLFFLCVALTQFVPSLRVGPLYAYWAPLGFVLFVTLMKEAYDDIKRYLRDKKENAQKYKKITSNGVKTVASSDIEIGDLILVEKNQRVPADMIFLRTTDKTGTNFIRTDQMDGETDWKLRIAVPTCQRLPTDEDLLHINAFVYAEKPEKDIYNFIGTFCKDNGERE-DVSLNVENTLWANTVVATGEAIGVVIYTGNETRSVMNTSYPKTKFGLLDSELNNLTKVLFCLVLALSLTLVCLKGFEGAWYKSLIRFTILFSYIIPISLRINLDMAKLVYSWFISRDDEIPDTVVRTSTIPEELGRISYLLTDKTGTLTQNEMVFKKLHLGTVSFGQDSMDEVRTYLHSVYAN-------------PTKTESSTSKKTIKRTVVTRVYEAVKALALCHNVTPVVDENTPRSATPEINGHIELKETGGTSDIVYQASSPDEVALVTWTESIGLTLIHRDLNEIHLRSPVGDTLKYRVLQVFPFTSETKRMGIIVKDLDTGEILFYMKGADAVMQNHVNYNDWLEEECGNMAREGLRTLVVAKKSLTEEQFQDFEYRYNQAKLSVEDRAVKVLKVEESLIYDMELLCLTGVEDKLQQDVKPTLELLRNAGIKIWMLTGDKMETAICIAQSSRLVAKTQSIYQFKLVTNRAEAHLELNSFRRKCDHALVIKGDSLETVIKHYEHEFMELAIQCPSVVVCRCTPTQKADIVQLLKTHTGKRTCAIGDGGNDVSMIQMADAGIGLVGKEGKQASLAADFSMTQFSHLGRLLIWHGRNSYKRSAALGQFVIHRGLIISVIQAVFSCAFFYISVPLYHGMLQVGYSTVYTTAPVFSLVLDVDVRDDIAMTYPELYKDLVKGRHLSYKTFFVWLLVSIYQGGIIMFGALFLFEDDFIHIVSISFTTLILTELIMVALSVRTWHWLMLFAEFLSLLIYVVSVVILKNEF-----------DEQFITSVPFYWKTLVITLVSCLPLYILKLLRKRFAPPNYSKLT 1087
            D  PL+ S+     +E DY        + L       +K+         W +C G    C   CG   + +   + E + R V  G  +K      RN I+NQKY+V TFIP VL+ QFK+FLNL+FL ++ +QFVP+L++G LY YWAPLGFVL VT+ +EA D+ +R+ RDK+ N+Q Y K+T  G   V SSDI++GDLI+VEKNQR+P+DM+FLRT++K G+ FIRTDQ+DGETDWKL++AV   Q+LP   DL  I+A+VYA+KP+ DI++F GTF +++ +     SL++ENTLWA+T+VA+G  IGVVIYTG ETRSVMNTS PK K GLLD ELN LTK LF  ++ALS+ +V L+GF G WY++L RF +LFSYIIPISLR+NLDM K VY W + +D+ IP TVVRTSTIPEELGR+ YLLTDKTGTLTQNEM+FK+LHLGTVS+G D+MDE+++++   Y+              P +   S++ K ++++V +R++EAVKA+ LCHNVTPV +    R+   E     E  +     +  YQASSPDEVALV WTES+GLTL+ RDL  + L++P G  L + +LQ+FPFTSE+KRMG+IV+D  T EI FYMKGAD  M   V YNDWLEEECGNMAREGLRTLVVAKK+LTEEQ+QDFE RY QAKLS+ DR++KV  V ESL  +MELLCLTGVED+LQ DV+PTLE+LRNAGIKIWMLTGDK+ETA CIA+SS LV++TQ I+ F+ VT+R EAHLELN+FRRK D ALVI GDSLE  +K+YEHEF+ELA QCP+VV CRC+PTQKA IV LL+ HTG+RTCAIGDGGNDVSMIQ AD GIG+ GKEGKQASLAADFS+TQF H+GRLL+ HGRNSYKRSAALGQFV+HRGLIIS +QAVFS  F++ SVPLY G L VGY+T+YT  PVFSLVLD DV+ ++AM YPELYKDL KGR LS+KTF +W+L+SIYQGGI+M+GAL LFE +F+H+V+ISFT LILTEL+MVAL+VRTWHWLM+ AEFLSL  YV S+  L   F           D  FIT+V F WK   IT+VSCLPLY+LK LR++ +PP+Y KL 
Sbjct:   51 DEMPLMMSEEGFENEESDY--------HTLPRARIMQRKRG------LEWFVCDGWKFLCTSCCG-WLINICRRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVISCSQFVPALKIGYLYTYWAPLGFVLAVTMTREAIDEFRRFQRDKEVNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQQLPALGDLFSISAYVYAQKPQMDIHSFEGTFTREDSDPPIHESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNRLTKALFLALVALSIVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAVYGWMMMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSYGADTMDEIQSHVRDSYSQMQSQAGGNNTGSTPLRKAQSSAPK-VRKSVSSRIHEAVKAIVLCHNVTPVYES---RAGVTEETEFAEADQDFSDENRTYQASSPDEVALVQWTESVGLTLVSRDLTSMQLKTPSGQVLSFCILQLFPFTSESKRMGVIVRDESTAEITFYMKGADVAMSPIVQYNDWLEEECGNMAREGLRTLVVAKKALTEEQYQDFESRYTQAKLSMHDRSLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRQVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLKYYEHEFVELACQCPAVVCCRCSPTQKARIVTLLQQHTGRRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAMLYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALVLFESEFVHVVAISFTALILTELLMVALTVRTWHWLMVVAEFLSLGCYVSSLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLRRKLSPPSYCKLA 1146

The following BLAST results are available for this feature:

BLAST of TCONS_00047409-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047409-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ATP9B	0.000e+0	60.27	Probable phospholipid-transporting ATPase IIB OS=H...	[more]

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TCONS_00047409-protein (polypeptide) - C. hemisphaerica