TCONS_00047229-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00047229-protein
Unique NameTCONS_00047229-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00047229-protein ID=TCONS_00047229-protein|Name=TCONS_00047229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MKSLIILVLTAILPNLLKASTTTDDISLLKSQVKALSKQIAETNQKLAHV
TQENRYLTMKDQVQNGVCHFSTNPCEPCFCVEDYSMVEKYYCDCRAQPIR
RDCKEHYDQGERISGLYVINKNAYSLAVQVYCDHVTDGGGWTVFQRRVDG
SENFYRNWTEYEIGFGRLNREFWLGNENLYRLTAQAFMKGSEVRFDMQKR
GSSSLTWAKYSNFELTSKSTGYELHISGYSGNAGDHMTYHNGAKFSTYDR
DLDNQPSVDCATRHRGAFWYKSCHWVNINGYYDEFKEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_030084XLOC_030084Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00047229TCONS_00047229Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..53
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 98..288
e-value: 5.5E-65
score: 231.9
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 100..282
e-value: 2.0E-57
score: 194.5
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 94..288
score: 47.576
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 101..282
e-value: 1.16825E-82
score: 249.465
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 94..283
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 19..243
e-value: 1.3E-61
score: 207.5
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 244..287
e-value: 9.0E-19
score: 66.9

Blast
[Close]
BLAST of TCONS_00047229-protein vs. Swiss-Prot (Human)
Match: MFAP4 (Microfibril-associated glycoprotein 4 OS=Homo sapiens GN=MFAP4 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.313e-51
Identity = 87/218 (39.91%), Postives = 137/218 (62.84%), Query Frame = 0 
Query:   71 STNPCEPCFCVEDYSMVEKYYCDCRAQPIRRDCKEHYDQGERISGLYVINKNAYSLAVQVYCDHVTDGGGWTVFQRRVDGSENFYRNWTEYEIGFGRLNREFWLGNENLYRLTAQAFMKGSEVRFDMQKRGSSSLTWAKYSNFELTSKST-----GYELHISGYS-GNAGDHMTYHNGAKFSTYDRDLDNQPSVDCATRHRGAFWYKSCHWVNINGYY 282
            ST PC P         +E++   C  QP+  DC + Y QG +  G+Y+I  +  S+ V V+CD  T+GG WTVFQ+R +GS +F+R W +Y++GFGR + E+WLG +N++ LT +   +  E+R D++    ++  +AKY++F ++  +      GY L ++G+  G AGD ++YH+G KFST+DRD D     +CA    GAFW++SCH+ N+NG+Y
Sbjct:   14 STPPCAPQVSGIRGDALERF---CLQQPL--DCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGLQNMHLLTLK---QKYELRVDLEDF-ENNTAYAKYADFSISPNAVSAEEDGYTLFVAGFEDGGAGDSLSYHSGQKFSTFDRDQDLFVQ-NCAALSSGAFWFRSCHFANLNGFY 221
The following BLAST results are available for this feature:
BLAST of TCONS_00047229-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFAP44.313e-5139.91Microfibril-associated glycoprotein 4 OS=Homo sapi... [more]
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