TCONS_00046918-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046918-protein
Unique NameTCONS_00046918-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046918-protein ID=TCONS_00046918-protein|Name=TCONS_00046918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
MSTKFLSRSFIFSIGRQWCQIRNGSTNTGKVIVASKEPFCESLTKGTRYS
WCTCGLSHKQPFCDGSHEGSGMRPHRMKAEETCEVFFCGCKQTKTPPYCD
GSHMSDDVQACVIGSSLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029933XLOC_029933Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046918TCONS_00046918Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018967FeS-contain_CDGSH-typ
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018967Iron sulphur-containing domain, CDGSH-typeSMARTSM00704znf_cdgshcoord: 36..73
e-value: 9.3E-7
score: 38.5
coord: 74..109
e-value: 0.0034
score: 22.9
IPR018967Iron sulphur-containing domain, CDGSH-typePFAMPF09360zf-CDGSHcoord: 42..67
e-value: 2.0E-8
score: 34.2
coord: 80..103
e-value: 2.5E-6
score: 27.5

Blast
[Close]
BLAST of TCONS_00046918-protein vs. Swiss-Prot (Human)
Match: CISD3 (CDGSH iron-sulfur domain-containing protein 3, mitochondrial OS=Homo sapiens GN=CISD3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.499e-26
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0 
Query:   29 GKVIVASKEPFCESLTKGTRYSWCTCGLSHKQPFCDGSH--EGSGMRPHRMKAEETCEVFFCGCKQTKTPPYCDGSHMSDDVQACVIGSSL 117
             + +VA K P    L  G  Y WC CG S KQPFCDGSH  + +G+ P + KA+ET  V  C CK T+ PPYCDG+H S+ VQ   +GS L
Sbjct:   37 ARSVVALKTPIKVELVAGKTYRWCVCGRSKKQPFCDGSHFFQRTGLSPLKFKAQETRMVALCTCKATQRPPYCDGTHRSERVQKAEVGSPL 127
The following BLAST results are available for this feature:
BLAST of TCONS_00046918-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CISD31.499e-2649.45CDGSH iron-sulfur domain-containing protein 3, mit... [more]
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