TCONS_00046893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046893-protein
Unique NameTCONS_00046893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046893-protein ID=TCONS_00046893-protein|Name=TCONS_00046893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MKLSNKHLEALEADHFHHLGFDTQSVDVRKKFSDVKFVCVSGSSNRISKF
AKFINSQLQVLKDEDIVNLCTGDRYVMYKVGPVLMANHGMGVPSTSILMH
ELFKLLHYAGAEDVAFFRIGTSGGLGLTPGTVVITNRALNAYAEPKFTQV
VLGKTVEQDASFLNSISDELMSLTRDSEEKVLFEVVIGDTMCCDDFYEGQ
ARLDGAFCNYTEEDKMGYLKELHQKGVRNIEMESTLFASLCNRAGIKASV
VCVALLDRLLGDQVNITKEMKTEFEQRPWWVVLKYIKKHISK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029920XLOC_029920Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046893TCONS_00046893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000845Nucleoside_phosphorylase_d
IPR010059Uridine_phosphorylase_euk
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
GO:0009166nucleotide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004850uridine phosphorylase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0009166 nucleotide catabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004850 uridine phosphorylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1580coord: 1..291
e-value: 1.5E-39
score: 135.4
IPR000845Nucleoside phosphorylase domainPFAMPF01048PNP_UDP_1coord: 37..260
e-value: 6.3E-22
score: 77.9
IPR000845Nucleoside phosphorylase domainSUPERFAMILY53167Purine and uridine phosphorylasescoord: 18..282
IPR010059Uridine phosphorylase, eukaryoticTIGRFAMTIGR01719TIGR01719coord: 5..291
e-value: 2.3E-113
score: 376.2

Blast
[Close]
BLAST of TCONS_00046893-protein vs. Swiss-Prot (Human)
Match: UPP2 (Uridine phosphorylase 2 OS=Homo sapiens GN=UPP2 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 4.328e-96
Identity = 135/290 (46.55%), Postives = 199/290 (68.62%), Query Frame = 0 
Query:    3 LSNKHLEALEADHFHHLGFDTQSVDVRKKFSDVKFVCVSGSSNRISKFAKFINSQLQVLK-DEDIVNLCTG-DRYVMYKVGPVLMANHGMGVPSTSILMHELFKLLHYAGAEDVAFFRIGTSGGLGLTPGTVVITNRALNAYAEPKFTQVVLGKTVEQDASFLNSISDELMSLTRDSEEKVLFEVVIGDTMCCDDFYEGQARLDGAFCNYTEEDKMGYLKELHQKGVRNIEMESTLFASLCNRAGIKASVVCVALLDRLLGDQVNITKEMKTEFEQRPWWVVLKYIKKHI 290
            + N +L+ ++ D  +HL   T++ ++   F DVKFVCV GS NR+  FA F++ +L   + +EDI ++C G DRY MYK GPVL  +HGMG+PS SI++HEL KLLH+A   DV   RIGTSGG+G+ PGTVVIT+ A++++ +P+F QV+L   V +       +S+EL + +++      F  ++G TMC  DFYEGQ RLDGA C+++ E K+ YLK   + GVRNIEMEST+FA++C   G+KA+VVCV LLDRL  DQ+N+  ++  E++QRP  ++  +I++ +
Sbjct:   27 VKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISIMLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVTRSTELDKELSEELFNCSKEIPN---FPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLLISNFIRRRL 313
The following BLAST results are available for this feature:
BLAST of TCONS_00046893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UPP24.328e-9646.55Uridine phosphorylase 2 OS=Homo sapiens GN=UPP2 PE... [more]
back to top