TCONS_00046669-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00046669-protein
Unique Name	TCONS_00046669-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	614

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00046669-protein ID=TCONS_00046669-protein|Name=TCONS_00046669-protein|organism=Clytia hemisphaerica|type=polypeptide|length=614bp
MKFLASLLALCSCTKIQANEDDQNGLDNDQPDGPQSQPIIRDNVTSAKSA
NINSATIATFSINRFNQKKYENNEVKEYLLKILSRYDFIFIQEVQDESEE
FIHLFIEELKGMTGKSYKYKLGKASGRKSKKNQLMFLYRDSLFTLIDHYQ
YQDNDDKFERQPFIAKFRSNKLEVEEFAVIGVCLHYDSVEAEINHLASVH
EEMKNFWGDIPTLIMGNFMTGGSHISKTKLRETALQKDSNYVWFVDNIDT
TVLKNKYCYDRIIGYGNIMENIQLDSVKAFRFDDEFGLSMDEAKAITDHY
PVEVVIGPKVFSNDVEEKPANSFSYAIDNNDLNDIEVDFNDLKISEKEVE
GVLSIGSFNVQRFGEKKMNNEFVVKHLYKIMERYDLVLIQEVQDQDLENV
PNFVENFRKATNKDYEYKISESLGRKTYKEQYLYIYRRDLMEVFYNDIYD
DGDESKGEDTFAREPYIMHIKSHLLPANGIILVGAHIAPKKVAQELEEMV
KVHAFIKEKFSEGISVVFMGDFNADGSYLSNRKKEKLTFFKDNDYKWILD
EDTDTTLAKNDYTYDRIIIYGQALNEMIIADSAKAFYYDEAFSLTNEEAK
DISDHYPVEFKIGI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029783	XLOC_029783	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00046669	TCONS_00046669	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016202	DNase_I
IPR005135	Endo/exonuclease/phosphatase

Vocabulary: **Molecular Function**
Term	Definition
GO:0004536	deoxyribonuclease activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006308	DNA catabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006308	DNA catabolic process
molecular_function	GO:0004536	deoxyribonuclease activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016202	Deoxyribonuclease I	PRINTS	PR00130	DNASEI	coord: 363..392 score: 47.5 coord: 538..567 score: 27.92 coord: 393..422 score: 23.33 coord: 508..537 score: 30.83 coord: 567..589 score: 26.63 coord: 590..610 score: 57.14 coord: 432..461 score: 43.75
IPR016202	Deoxyribonuclease I	SMART	SM00476	dnai3	coord: 39..307 e-value: 1.2E-16 score: 67.2 coord: 342..613 e-value: 5.1E-53 score: 192.1
IPR005135	Endonuclease/exonuclease/phosphatase	GENE3D	3.60.10.10		coord: 56..307 e-value: 9.9E-26 score: 90.1 coord: 353..613 e-value: 7.3E-31 score: 107.0
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 356..531 e-value: 4.2E-7 score: 29.7
IPR005135	Endonuclease/exonuclease/phosphatase	SUPERFAMILY	56219	DNase I-like	coord: 353..610
IPR005135	Endonuclease/exonuclease/phosphatase	SUPERFAMILY	56219	DNase I-like	coord: 56..306

Blast

[Close]

BLAST of TCONS_00046669-protein vs. Swiss-Prot (Human)
Match: DNAS1 (Deoxyribonuclease-1 OS=Homo sapiens GN=DNASE1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 9.931e-58
Identity = 96/261 (36.78%), Postives = 148/261 (56.70%), Query Frame = 0

Query:  353 LSIGSFNVQRFGEKKMNNEFVVKHLYKIMERYDLVLIQEVQDQDLENVPNFVENFRKATNKDYEYKISESLGRKTYKEQYLYIYRRDLMEVFYNDIYDDGDESKGEDTFAREPYIMHIKSHLLPANGIILVGAHIAPKKVAQELEEMVKVHAFIKEKFSEGIS-VVFMGDFNADGSYLSNRKKEKLTFFKDNDYKWILDEDTDTTLAKNDYTYDRIIIYGQALNEMIIADSAKAFYYDEAFSLTNEEAKDISDHYPVEFKI 612
            L I +FN+Q FGE KM+N  +V ++ +I+ RYD+ L+QEV+D  L  V   ++N  +     Y Y +SE LGR +YKE+YL++YR D +    +  YDDG E  G DTF REP I+   S         +V  H AP     E++ +  V+  ++EK+  G+  V+ MGDFNA  SY+   +   +  +    ++W++ +  DTT       YDRI++ G  L   ++ DSA  F +  A+ L+++ A+ ISDHYPVE  +
Sbjct:   23 LKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKW--GLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVML 281

HSP 2 Score: 151.369 bits (381), Expect = 2.044e-41
Identity = 85/260 (32.69%), Postives = 134/260 (51.54%), Query Frame = 0

Query:   54 SATIATFSINRFNQKKYENNEVKEYLLKILSRYDFIFIQEVQDESEEFIHLFIEELKGMTGKSYKYKLGKASGRKSKKNQLMFLYRDSLFTLIDHYQYQD-----NDDKFERQPFIAKFRSNKLEVEEFAVIGVCLHYDSVEAEINHLASVHEEMKNFWGDIPTLIMGNFMTGGSHISKTKLRETALQKDSNYVWFV-DNIDTTVLKNKYCYDRIIGYGNIMEN-IQLDSVKAFRFDDEFGLSMDEAKAITDHYPVEVVI 306
            S  IA F+I  F + K  N  +  Y+++ILSRYD   +QEV+D     +   ++ L      +Y Y + +  GR S K + +F+YR    + +D Y Y D      +D F R+P I +F S   EV EFA++ +        AEI+ L  V+ +++  WG    ++MG+F  G S++  ++     L     + W + D+ DTT       YDRI+  G ++   +  DS   F F   +GLS   A+AI+DHYPVEV++
Sbjct:   22 SLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVML 281

The following BLAST results are available for this feature:

BLAST of TCONS_00046669-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00046669-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DNAS1	9.931e-58	36.78	Deoxyribonuclease-1 OS=Homo sapiens GN=DNASE1 PE=1...	[more]

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TCONS_00046669-protein (polypeptide) - C. hemisphaerica