TCONS_00046563-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046563-protein
Unique NameTCONS_00046563-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046563-protein ID=TCONS_00046563-protein|Name=TCONS_00046563-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
FGIPTVKRSHAYYLMDTLRSLMSRAPDDVKKRKEILIIILVADQRKDYLR
QVTMDVNSEYETEVKNGLIQVIVPNESFYPNMFNLPQLYGDDQRRVYWRS
KQSLDYSFLYYYCKELGEYFVQLEDDVIAASQYYRKMRAFIKKNEYNNWS
VLEFGSQGFIGMTYRTKHLKTLSKFIRFFYWTRPVDWLFRDYNQIYLNGN
PSNFRIRPPVFLHAGKFSSLDGQVRKLGRGAKSAQSRTEREQLLHWPGQR
RYQSKEGNPLAKITSTIDQHFGSNRLRNPYGPKGVFWAKGVHKKDNITIQ
FNKTQNISQIVFVSGPEGFKNDRFYTTRLFVSYTKPSIDGCSDFESVGVF
GTPIVQYKIEDDVKRPVWCVRLMLEKVIQKRWIMVEEIAIHVDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029712XLOC_029712Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046563TCONS_00046563Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006759Glycosyl transferase family 54PFAMPF04666Glyco_transf_54coord: 1..227
e-value: 1.7E-64
score: 217.4

Blast
[Close]
BLAST of TCONS_00046563-protein vs. Swiss-Prot (Human)
Match: MGT4A (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT4A PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.400e-53
Identity = 108/344 (31.40%), Postives = 180/344 (52.33%), Query Frame = 0 
Query:    1 FGIPTVKRSHAYYLMDTLRSLMSRA-PDDVKKRKEILIIILVADQRKDYLRQVTMDVNSEYETEVKNGLIQVIVPNESFYPNMFNLPQLYGDDQRRVYWRSKQSLDYSFLYYYCKELGEYFVQLEDDVIAASQYYRKMRAFIKKNEYNNWSVLEFGSQGFIGMTYRTKHLKTLSKFIRFFYWTRPVDWLFR----------DYNQIYLNGNPSNFRI--RPPVFLHAGKFSSLDGQVRKLGRGAKSAQSRTEREQLLHWPGQRRYQSKEGNPLAKITSTIDQHFGSNRLRNPYGPKGVFWAKGVHKKDNITIQFNKTQNISQIVFVSGPEGFKNDRFYTTRLFV 331
             GIPTVKR    YL++TL SL+    P++   + + +I++ + +   DY+  V  ++  E+  E+ +GL++VI P ES+YP++ NL + +GD + RV WR+KQ+LDY FL  Y +E G Y++QLEDD+I    Y+  ++ F  +     W +LEF   GFIG  ++   L  + +FI  FY  +P+DWL            + +  + +   +N RI  RP +F H G  SSL G+++KL          T+++ +     +        NP A++++++  + G + L   Y  +  FWA      D I  +F+K  N+   +F SG +    D    T + V
Sbjct:  139 MGIPTVKREVKSYLIETLHSLIDNLYPEE---KLDCVIVVFIGETDIDYVHGVVANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKL----------TDKDYM-----KPLLLKIHVNPPAEVSTSLKVYQG-HTLEKTYMGEDFFWAITPIAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEV 463
The following BLAST results are available for this feature:
BLAST of TCONS_00046563-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT4A6.400e-5331.40Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
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