TCONS_00046556-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046556-protein
Unique NameTCONS_00046556-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length849

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046556-protein ID=TCONS_00046556-protein|Name=TCONS_00046556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=849bp
MKVDYKFSNLCGTVYRKGNVVFSASGDRLYSPVGNRVTCFDLKNNKSSTL
PFENNCNISKICLCSQKNLLFSIDEVGKCLIYNLLTQTVVDTISFKKKVK
CIKFSPSGEFYATTHARGFKVWRSPGITKTFHSTTLLKVLSGAYDETTCL
NWSSDSRFIVIGGKDMTVRVYPVFSMEKFKVFSLTGHRSTIINCFFEKDS
LNVYSISRDSALSVWTASHNPEELESKYEVRKRKLENDDEESGEEKSDEE
DEEEQVSWTLEKKHLFGQEKSSISSAEYHEDKKILVVGHTSGVFQLYEMP
EFIQIHSLSISQYKINTVAINASSEWLAFGSAALGQLLVWEWQSETYVLK
QQGHFYDMNVMAYSPDGQYIATGGDDGKVKVWNTISGFCFVTFTQHSGGI
TGVEFSQNGQVILSSSLDGSVRAFDLNRYRNFRTFTGPRPCQFYCLALDN
SGEIICAGSLDTFEICMWSLQTGRLLEVLSGHEGPVSCLSFSPAKAILVS
GSWDKTVRLWDVYASTSPKDTISIGSDVTAVTHRPDGHEIAVASLDGEIR
FWDPDTCRLNGSIEGRRDLLVGRRKNDLVSSKQLMSRRCFTSLCYSADGH
HLLAGGKSRHVCIYHIRQEIMLRRFNISNNMSLDGMQVFKHSKRGMTEAG
PIDLMDLDNRSDDEDGDKSLIALPGVKKGDMSSRRVQPEVQTKALRFSPA
GRSWAAATTEGLLIFSLDGSVAFQPEGLDLDITPEKILELSNNKEHSNAL
NYAFRLNEQKYMIRVIENIKIDDVSTLVQGVPRMFLSKLLEFVGKQLEDS
PHVQFYLAWCKHILSCHGGYIKSHSRSYLPTLRLIQKNLVRHSSSLTSL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029706XLOC_029706Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046556TCONS_00046556Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR007148SSU_processome_Utp12
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..252
NoneNo IPR availableGENE3D2.40.50.140coord: 429..450
e-value: 0.19
score: 10.9
NoneNo IPR availableGENE3D2.80.10.50coord: 451..508
e-value: 1.7E-20
score: 72.5
NoneNo IPR availableGENE3D1.10.10.670coord: 509..579
e-value: 1.5E-13
score: 49.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..255
NoneNo IPR availableCDDcd00200WD40coord: 270..553
e-value: 1.48215E-51
score: 181.379
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 498..512
score: 47.17
coord: 370..384
score: 32.03
coord: 540..554
score: 31.75
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 344..383
e-value: 3.4E-7
score: 39.9
coord: 177..216
e-value: 3.0
score: 14.0
coord: 580..615
e-value: 0.78
score: 17.7
coord: 472..511
e-value: 9.7E-12
score: 55.0
coord: 43..83
e-value: 470.0
score: 0.1
coord: 515..553
e-value: 0.0021
score: 27.3
coord: 301..341
e-value: 51.0
score: 6.2
coord: 86..123
e-value: 1.6
score: 15.7
coord: 133..172
e-value: 3.4E-4
score: 29.9
coord: 386..425
e-value: 1.6E-6
score: 37.6
coord: 428..469
e-value: 18.0
score: 9.0
coord: 259..298
e-value: 10.0
score: 10.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 526..553
e-value: 0.1
score: 13.4
coord: 389..424
e-value: 1.9E-4
score: 22.1
coord: 474..511
e-value: 3.8E-10
score: 40.1
coord: 136..171
e-value: 0.0042
score: 17.8
coord: 353..383
e-value: 4.8E-6
score: 27.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 479..512
score: 16.758
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 184..215
score: 8.871
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 140..181
score: 8.637
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 393..434
score: 12.246
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 351..383
score: 14.151
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 528..553
score: 9.506
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 255..373
e-value: 2.4E-16
score: 59.0
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 580..827
e-value: 2.3E-6
score: 26.4
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 10..109
e-value: 6.9E-10
score: 37.8
coord: 110..240
e-value: 4.4E-16
score: 58.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 374..428
e-value: 2.1E-22
score: 79.3
IPR007148Small-subunit processome, Utp12PFAMPF04003Utp12coord: 759..849
e-value: 9.1E-19
score: 67.6
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 498..512
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 370..384
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 140..562
score: 44.162
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 20..218
coord: 259..308
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 267..635

Blast
[Close]
BLAST of TCONS_00046556-protein vs. Swiss-Prot (Human)
Match: PWP2 (Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=2 SV=2)

HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0
Identity = 416/867 (47.98%), Postives = 579/867 (66.78%), Query Frame = 0 
Query:    1 MKVDYKFSNLCGTVYRKGNVVFSASGDRLYSPVGNRVTCFDLKNNKSSTLPFENNCNISKICLCSQKNLLFSIDEVGKCLIYNLLTQTVVDTISFKKKVKCIKFSPSGEFYATTHARGFKVWRSPGITKTFHSTTLLKVLSGAYDETTCLNWSSDSRFIVIGGKDMTVRVYPVFSMEKFKVFSLTGHRSTIINCFFEKDSLNVYSISRDSALSVWTASHNPEELESK----------------YEVRKRKLENDDEESGEEKSDEEDEEEQVSWTLEKKHLFGQEK--SSISSAEYHEDKKILVVGHTSGVFQLYEMPEFIQIHSLSISQYKINTVAINASSEWLAFGSAALGQLLVWEWQSETYVLKQQGHFYDMNVMAYSPDGQYIATGGDDGKVKVWNTISGFCFVTFTQHSGGITGVEFSQNGQVILSSSLDGSVRAFDLNRYRNFRTFTGPRPCQFYCLALDNSGEIICAGSLDTFEICMWSLQTGRLLEVLSGHEGPVSCLSFSPAKAILVSGSWDKTVRLWDVYASTSPKDTISIGSDVTAVTHRPDGHEIAVASLDGEIRFWDPDTCRLNGSIEGRRDLLVGRRKNDLVSSKQLMSRRCFTSLCYSADGHHLLAGGKSRHVCIYHIRQEIMLRRFNISNNMSLDGMQVFKHSKRGMTEAGPIDLMDLDNRSDDEDGDKSLIALPGVKKGDMSSRRVQPEVQTKALRFSPAGRSWAAATTEGLLIFSLDGSVAFQPEGLDLDITPEKILELSNNKEHSNALNYAFRLNEQKYMIRVIENIKIDDVSTLVQGVPRMFLSKLLEFVGKQLEDSPHVQFYLAWCKHILSCHGGYIKSHSRSYLPTLRLIQKNLVRHSSSLTSL 849
            MK  Y+FSNL GTVYR+GN+ F+  G+ + SPVGNRVT FDLKNNKS TLP     N+  + L     L   +DE G  L+ +L+ ++V+    FK  V  + FSP G  +  T     +++ +PG  + F++  L K   G YDETTC++W+ DSR  V+G KDM+  V+     +    ++L GH+  I+ CFFE +SL++YS+S+D  L +W     PE L  K                 E   ++ + +    G+    EE++  +V ++   K+ F +E   +++++A +H+   +LV G  SG+F L+E+PEF  IHSLSIS   I +VAIN+S +W+AFG + LGQLLVWEWQSE+YVLKQQGHF  M  +AYSPDGQYI TGGDDGKVKVWNT+SGFCFVTFT+HS G+TGV F+  G V+++SS+DG+VRAFDL+RYRNFRTFT PRP QF C+A+D SGEI+ AG+ D+FEI +WS+QTGRLL+VLSGHEGP+S L F+P K++L S SWDKTVRLWD++ S   K+T+++ SD  AVT RPDG E+AVA+L+ +I FWDP+     GSIEGR DL  GR++ D +++K     + FT+LCYSADGH +LAGG S+ VCIYH+R++I+++RF IS N+SLD M+ F + +R MTE G + L+D D  +  EDG    I LPGV+KGDMSSR  +PE++  +LRFSP GR WAA TTEGLLI+SLD  V F P  LD  +TP ++ E    ++ + A+  A RLNE K +   +E +   ++  +   +P +++ K+LEF+    E S H++FYL W   +L  HG  +KS + + LP ++ +QK++ RH   L+ L
Sbjct:    1 MKFAYRFSNLLGTVYRRGNLNFTCDGNSVISPVGNRVTVFDLKNNKSDTLPLATRYNVKCVGLSPDGRLAIIVDEGGDALLVSLVCRSVLHHFHFKGSVHSVSFSPDGRKFVVTKGNIAQMYHAPGKKREFNAFVLDKTYFGPYDETTCIDWTDDSRCFVVGSKDMSTWVFGAERWDNLIYYALGGHKDAIVACFFESNSLDLYSLSQDGVLCMWQCDTPPEGLRLKPPAGWKADLLQREEEEEEEEDQEGDRETTIRGKATPAEEEKTGKVKYSRLAKYFFNKEGDFNNLTAAAFHKKSHLLVTGFASGIFHLHELPEFNLIHSLSISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFRPDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKGKAFTALCYSADGHSILAGGMSKFVCIYHVREQILMKRFEISCNLSLDAMEEFLN-RRKMTEFGNLALIDQD--AGQEDG--VAIPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLDTRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQKLKSRAGTLLPVIQFLQKSIQRHLDDLSKL 862
The following BLAST results are available for this feature:
BLAST of TCONS_00046556-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PWP20.000e+047.98Periodic tryptophan protein 2 homolog OS=Homo sapi... [more]
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