TCONS_00046325-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046325-protein
Unique NameTCONS_00046325-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length464

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046325-protein ID=TCONS_00046325-protein|Name=TCONS_00046325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MREKNMSVEDKKKSVHQKNVIDAAHKEVEKYIKFFVLKSLQAIVSSRIGI
HNKTRCKPAAKGQDWFNIALHECEANRRLQAKVRDIYGKKIPTLWDPISL
DIILRTFDGNYIILETWQLSTNLENKDPKHKNHFSIYNRLGILLKSVLSI
SRVLPSFNLAKKNEKDFSLFFKVHTEVYSLHQYELHNSLSIGFVKTPIGT
VNIKTMYRSKVWLSGSFHAHTYKISDPDSLLPLFNEKDGGLSKSAFQSID
MFENELALAVSDQEWINSTYSTSSNVQSKTKHSVTSPVDFSSVAASIGHE
DGLRQIAAFVEPFTLSDINLEPLDLPKLPPTPPFQSLLPGKSPTDNVDAN
LDHDKGTKQESNFKSLPMNKRQSTEIYRQAEAVGFEDDFVLVELRPAFFS
EDDTVGNLYKQCQSPVPLDIFTSLEQEDQDSESIDLDAQLEKCRKELMEY
QEFFSDTLKTEKSI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029575XLOC_029575Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046325TCONS_00046325Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018731Atg13
Vocabulary: Cellular Component
TermDefinition
GO:1990316ATG1/ULK1 kinase complex
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
cellular_component GO:1990316 ATG1/ULK1 kinase complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018731Autophagy-related protein 13PFAMPF10033ATG13coord: 111..210
e-value: 1.6E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..362

Blast
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BLAST of TCONS_00046325-protein vs. Swiss-Prot (Human)
Match: ATG13 (Autophagy-related protein 13 OS=Homo sapiens GN=ATG13 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.778e-24
Identity = 60/185 (32.43%), Postives = 110/185 (59.46%), Query Frame = 0 
Query:   25 HKEVEKYIKFFVLKSLQAIVSSRIGIHNKTRCKPAAKGQDWFNIALHECEANRRLQAKVRDIYGKKIPTLWDPISLDIILRTFDGNYIILETWQLSTNLENKDPKHKNHFSIYNRLGILLKSVLSISRVLPSFNLAKKNEKDFSLFFKVH-TEVYSLHQYELHNSLSIGFVKTPIGTVNIKTMYR 208
             K+++K+IKFF LK++Q IV +R+G    TR   +  G DWFN+A+ +      +  + +     ++P +   + ++I L+T +G+ + LE W L  N E  D + K  +++YNRL +LLKS+L+I+RV P++ L++K   ++ + ++++  EV      E   ++ +G V TP+GT+ +   YR
Sbjct:   10 RKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIP---EVTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMN-EKCDKEIKVSYTVYNRLSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPVGTITLSCAYR 190
The following BLAST results are available for this feature:
BLAST of TCONS_00046325-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATG131.778e-2432.43Autophagy-related protein 13 OS=Homo sapiens GN=AT... [more]
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