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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00046047-protein ID=TCONS_00046047-protein|Name=TCONS_00046047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1475bp
MGSEFSTLVNTNKYWTKCVLALIVHGKKALLRVFHNDLGGNYAGLPKDPA
QLYNFFNQQKNRKVLNKLKSSKTLKQDQFDLILPPNSNLCNSNSFDITLI
VLLIITFVNIPPPLGGWKKVPKANDQSLAAFVVLIRNLRNLILHGSLDNF
DEPYFKNIWKDIKDCLIGLQYDQTMLKDFDELLTNDKVVFDFKDGTEFVE
GLLDFDELKEDIKKKFDSNFKQQDKELKKRLVSMKKDILRSAKKTLNEVA
EKRLEDFKLEMRQERREQMEDLRQDIEHEQDEMKDVQCKIIDDQRKMEEK
IDVISQKQKEKLTVPNHTLSTNKTFRVEKITPQDVVFVVNASDVYIIFNI
QCCRIGKRRVPQEIESCVHKVSNGLIWLQLRLKMEAPMEYEFKFTIMKNK
DGNIESIHEKIELADDVCSHIRRKGKDHKTLVFAHNDGTVNNIHQFKISN
GVETTHECQPITTGPSIAKFVKDFYERAKKYYTDHKSVRTFPPTYYLKPT
STSTFVDKLNTSLSKHGDQYSILSEYNPKTHLKLLGLDKISFESILHNLP
ESFYKNCVVMVHAKKRCVCVFVVIDDISKLTENLKALNNILKSIYFASFE
LFCTEYLSITGTLVFPDTEMKDLGHLMHLNIPEKSETLFITKQEFQENDF
AQWIDNLFKTIRSNFNTICSKDFQSNIDLFHTLCGTLMTVMAQTTQFLPR
VCENDTDQVKTILLNGEQIECITNPAKHKLIKACFGSGKTVLLIEMIRAI
LKEKDSQNYIIFLSYDPFSALDGKIRDTLKLISKEEKVPEDHYLNLKAIS
LTDALADAEFPVSDVFNLSSTPKRNIGDVLLHIKNKHPEKKVHFFVDEIP
CEMFDSEYSKELSRRLNADFKDNTVVFSLQSVEKKREIVQEGRTEKSSEI
DIKSTGMTLLKLTKTMRMSRTLHDLKEILEKEIESTSYSIPLEMKKKEEE
EEDNDKENPTNEEKVDYVESVGEDGPVSGANLTSTKESVEEERSGSAFGE
DSEDEQKSSTLTYLHDPEKILKSTGDDASYEVVKTLNTSVKFVDADCGHD
FPSEILPRLFYFDENFTFDSVDAITTLSIILRQCLESRNEEGVALICNNI
QEVKMTEAALLKSKTRKPVVFAPYLDVDVPLQKLKIDLVKNLENTDNVLI
SDYRTLRGLEVSHSIIIVDEEDIIGPNLLVEMITRTITDLDILVLPKTNK
QSPPTTIQNAFQKFDKQKLIHKIIVKVTKVNEATSSVELQGNGGETEHLE
PLALTNEDRKRFDEIKKLTKENEQLQESIRKLITNVNQFQLMTNKWDGTT
MESVTLNDGTTLSFDDVWNKILKEKKFAKFEEIFQQKPNIVNSMRDGYLG
MTLLMRAVIGDRFDVFVHLMNYPHDFSLVNTDGYNVLHVVGINGTVRHLE
KFDQQTIEMLIDGREEYNETPLHLAASENNHDVIRWLLAKGADHELKNKD
GQRPDEHEWCDGVTKEIFRSFRSSW Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 247..289 |
| None | No IPR available | COILS | Coil | Coil | coord: 1265..1292 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 708..1209
e-value: 1.2E-8
score: 34.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 940..1009 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 1350..1454
e-value: 1.29468E-15
score: 74.7274 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 1349..1378
e-value: 380.0
score: 8.2
coord: 1417..1446
e-value: 3.1E-5
score: 33.4 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 1417..1449
score: 13.224 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 1354..1448
e-value: 1.3E-8
score: 35.2 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 1210..1454
e-value: 9.8E-18
score: 63.9 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 1349..1454
score: 18.457 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 1338..1454 |
Blast
The following BLAST results are available for this feature:
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