TCONS_00046042-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046042-protein
Unique NameTCONS_00046042-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046042-protein ID=TCONS_00046042-protein|Name=TCONS_00046042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MAKYTLNYFQLPGRVEPIRLMFHAAGVEFTDNRLSVEEWASSKSDASRFP
LHRMPTLEVGGKIYCQSMAIVRFVARELGFYGNNATDQLMIDQLCETVLE
MFMQLSSIPYDLEPDVRKAKLEEFFASDKYNLPMGFLTKMLKENQNGEGF
FVGDKLSLADFQITGILILLKDIRDIKDEYPEIYALYQRVLNLEKIKKYM
DSQKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029414XLOC_029414Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046042TCONS_00046042Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004046GST_C
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 3..94
e-value: 8.7E-17
score: 60.6
NoneNo IPR availableGENE3D1.20.1050.10coord: 95..205
e-value: 5.8E-16
score: 58.4
NoneNo IPR availableSFLDSFLDG00363AMPS_(cytGST):_Alpha-,_Mu-,_Pcoord: 3..202
e-value: 0.0
score: 170.4
NoneNo IPR availableSFLDSFLDG01205AMPS.1coord: 1..203
e-value: 0.0
score: 172.2
NoneNo IPR availableCDDcd03039GST_N_Sigma_likecoord: 4..76
e-value: 2.23689E-24
score: 91.4564
NoneNo IPR availableCDDcd03192GST_C_Sigma_likecoord: 87..190
e-value: 9.2995E-17
score: 71.4998
IPR004046Glutathione S-transferase, C-terminalPFAMPF14497GST_C_3coord: 101..202
e-value: 8.5E-16
score: 57.9
IPR004045Glutathione S-transferase, N-terminalPFAMPF02798GST_Ncoord: 5..76
e-value: 1.6E-8
score: 34.7
IPR004045Glutathione S-transferase, N-terminalPROSITEPS50404GST_NTERcoord: 2..82
score: 23.417
IPR010987Glutathione S-transferase, C-terminal-likePROSITEPS50405GST_CTERcoord: 84..205
score: 17.366
IPR010987Glutathione S-transferase, C-terminal-likeSUPERFAMILY47616GST C-terminal domain-likecoord: 80..204
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 1..78

Blast
[Close]
BLAST of TCONS_00046042-protein vs. Swiss-Prot (Human)
Match: HPGDS (Hematopoietic prostaglandin D synthase OS=Homo sapiens GN=HPGDS PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.255e-19
Identity = 57/204 (27.94%), Postives = 99/204 (48.53%), Query Frame = 0 
Query:    1 MAKYTLNYFQLPGRVEPIRLMFHAAGVEFTDNRLSVEEWASSKSDASRFPLHRMPTLEVGGKIYCQSMAIVRFVARELGFYGNNATDQLMIDQLCETVLEMFMQLSSIPY-DLEPDVRKAKLEEFFASDKYNLPMGFLTKMLKENQNGEGFFVGDKLSLADFQ---ITGILILLKDIRDIKDEYPEIYALYQRVLNLEKIKKYM 200
            M  Y L YF + GR E IR +F    +++ D+R+   +W   K   S  P  ++P LEV G    QS+AI R++ +     GN   +Q  +D + +T L+ FM  S  P+ + + DV++    E      YN P   L + L     G  + +G+ ++ ADF     +  L++ K   D+ D +P +  L ++V  +  +  ++
Sbjct:    1 MPNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPEIK---STLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDT-LDDFM--SCFPWAEKKQDVKEQMFNELLT---YNAP--HLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKP--DLLDNHPRLVTLRKKVQAIPAVANWI 191
The following BLAST results are available for this feature:
BLAST of TCONS_00046042-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HPGDS1.255e-1927.94Hematopoietic prostaglandin D synthase OS=Homo sap... [more]
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