TCONS_00046002-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046002-protein
Unique NameTCONS_00046002-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length240

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046002-protein ID=TCONS_00046002-protein|Name=TCONS_00046002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
MAAVVRTFRRCVSNKIIKASSCYCHTSNVLRPNVSIQFGKQQVFPSVNRS
FHSSSVLNGDVVQFKLADIGEGIAEVQVTEWYVEVGDKVDQFDQICEVKS
DKASVTITSRFTGTVTKLHYDVDDEAKVGTPLVDIEVDGSADTEPQAEEQ
ISQDTSAAETLPPPPPPSQTAQTSTPAPTTPASTSSSTLATPAVRKIAKE
NNINLAVVPATGKDGRVLKEDILKFLQYKDSHPATTAGIL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029400XLOC_029400Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046002TCONS_00046002Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004167E3-bd
IPR000089Biotin_lipoyl
IPR0030162-oxoA_DH_lipoyl-BS
IPR011053Single_hybrid_motif
Vocabulary: Molecular Function
TermDefinition
GO:0016746transferase activity, transferring acyl groups
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016746 transferase activity, transferring acyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004167E3-binding domainPFAMPF02817E3_bindingcoord: 189..223
e-value: 2.2E-15
score: 56.6
IPR004167E3-binding domainGENE3D4.10.320.10coord: 184..235
e-value: 3.4E-18
score: 64.6
IPR004167E3-binding domainSUPERFAMILY47005Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complexcoord: 182..226
NoneNo IPR availableGENE3D3.90.1170.30coord: 19..105
e-value: 1.7E-12
score: 47.1
NoneNo IPR availableGENE3D2.40.50.100coord: 106..183
e-value: 4.0E-6
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..190
NoneNo IPR availableCDDcd06849lipoyl_domaincoord: 62..135
e-value: 2.70675E-24
score: 92.0823
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 63..135
e-value: 2.7E-20
score: 71.9
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 61..136
score: 24.95
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 86..115
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 61..147

Blast
[Close]
BLAST of TCONS_00046002-protein vs. Swiss-Prot (Human)
Match: ODB2 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DBT PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 1.069e-54
Identity = 108/234 (46.15%), Postives = 133/234 (56.84%), Query Frame = 0 
Query:    1 MAAV--VRTFRRCVSNKIIKASSCYCHTSNVLRPNVSIQFGKQQVFPSVNRS-----FHSSSVLNGDVVQFKLADIGEGIAEVQVTEWYVEVGDKVDQFDQICEVKSDKASVTITSRFTGTVTKLHYDVDDEAKVGTPLVDIEVDGSADTEPQAEEQISQDTSAAETLPPPPPPSQTAQTSTPAPTTPASTSSSTLATPAVRKIAKENNINLAVVPATGKDGRVLKEDILKFLQ 227
            MAAV  +RT+ R     I       C   +VL+PN    FG    +PS   S       +++ L G VVQFKL+DIGEGI EV V EWYV+ GD V QFD ICEV+SDKASVTITSR+ G + KL+Y++DD A VG PLVDIE +   D+E    E                    T   S    T        TLATPAVR++A ENNI L+ V  +GKDGR+LKEDIL +L+
Sbjct:    1 MAAVRMLRTWSRNAGKLICVRYFQTCGNVHVLKPNYVCFFG----YPSFKYSHPHHFLKTTAALRGQVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEALKDSEEDVVE--------------------TPAVSHDEHTHQEIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLE 210
The following BLAST results are available for this feature:
BLAST of TCONS_00046002-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODB21.069e-5446.15Lipoamide acyltransferase component of branched-ch... [more]
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