TCONS_00045939-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045939-protein
Unique NameTCONS_00045939-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045939-protein ID=TCONS_00045939-protein|Name=TCONS_00045939-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
MKAVQSKLTSMRAKLKESEDAVDVAAGELNQIIQKAEQMENKRAELSTQF
FEIEDRFEEGKSVLTGLMVNIEEGEKTFEETMKAYKIMENRVQKGANKIE
GLERELEIVKESIKENKVEHEESLKTINMLEETLNNAEERSNAADTRVKD
LEKGNTLLSSSRKKAW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029361XLOC_029361Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045939TCONS_00045939Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..154
NoneNo IPR availableCOILSCoilCoilcoord: 1..56
NoneNo IPR availableGENE3D1.20.5.340coord: 123..160
e-value: 0.041
score: 13.5
coord: 67..122
e-value: 0.021
score: 14.4
coord: 1..66
e-value: 8.8E-5
score: 22.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..166
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 2..158
IPR000533TropomyosinPFAMPF00261Tropomyosincoord: 7..153
e-value: 2.1E-12
score: 46.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045939-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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