TCONS_00045802-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00045802-protein
Unique Name	TCONS_00045802-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1109

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00045802-protein ID=TCONS_00045802-protein|Name=TCONS_00045802-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1109bp
MDLCLLSKLLALFHIQCIMLCHTFESTTNSQDVSPNTLEEHDDSSSSNFD
EKNLQHQSDFPDPGPPGNIGEDEHSDLPSESELLDLNKENYVDPNLSEDN
AKAVPDPPIDILISNDYLNISAIDNKIYIDEPIIQLKVNYSFQEYNNFYI
IGVYYEEISNAMPVKNVFFKHQFRYNFDEKISTNGTSIVNIPIPSQLIYY
DHQNSTMFTNYFVSKVEFKAMLVITDEQDGFEVTSTSVDSLDLLLQPPWD
RDQKPTYSFSWIGQIIDMLERRRIPKCQKHSDHKIISNIVPSLGQSSLGY
LRKVQEARWPSHLPPALAQHLEHSVGMTITFWMFITKPCNSGGCFIIQQR
NTTNFHSLVVILNNEGKLHVQAHDSRGHGEAFVSLERLPHNKWIFVMIRV
SVLDIKLKFNFNDQSHVYSYSRIYTSFNKGNNSFWASSGYFVQETFSGYL
AKFNVHQYESLDYQQYLKHFKDSDKQEINQIISEDSYQKCKAIKTMVNLA
LGHGILGKQTCSIEEILYPKRPPNTCALKKKRPYWRELKALREKLKVLRE
NWAKDKRDLHMMVDVGAAIHKDVMKNLTKKFTPDLMPLLNMAGCLGYGKS
YFVLATIHQYGISNVEPNQDKALSYHLMAAQLSEPLSHLSLAYRYQLTHN
GLLNDLELQAAHTRQAAIITKNELDQEKYEINTQSELIRLDEANSYSDTR
GGGSDLYKWLNQQAKMGSLEAKNQMADMLFHGKQGVEANQELAMEHFNDL
ADAGDPVAMVNLAVMHIKGINNMEKNVTKAKILLEKAVAKNSSFAYNVLG
FIEIHYNQNATAAMHYWKKGVEYGDVQSTFNYASVMEQTNHTEALKYYEK
AANQGDRHSIFRLAELLMEGTIIKRDPQKALEYYKVIGEQHESLGWFMRH
AMNHYLEGRRYSSIVNYLLALEGGLQLAGFNMALLLKEMDYNKENTMHLF
DAKPLFFVNFTAELGWSTSLVEMGDQSWTKENDTQKASLYYTRAVQKNDH
PEALYSLGYLVENQFSIDHSILIESASHWKEVHGNLTYAAKLYQSCMASQ
SENQEGYFPCQLALFKVQLKSLIYLTIPELWDTYQFEVMCFGMVLSALVP
FISYQIYYD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029278	XLOC_029278	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00045802	TCONS_00045802	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom
IPR013320	ConA-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 770..790
None	No IPR available	COILS	Coil	Coil	coord: 538..558
None	No IPR available	GENE3D	2.60.40.1180		coord: 703..784 e-value: 4.0E-14 score: 52.2 coord: 590..702 e-value: 4.8E-4 score: 19.5
None	No IPR available	GENE3D	2.60.120.200		coord: 311..489 e-value: 1.2E-6 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..78
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 904..1013
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 590..657
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 707..928
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 826..856 e-value: 15.0 score: 12.2 coord: 756..792 e-value: 2.6E-4 score: 30.3 coord: 598..634 e-value: 0.056 score: 22.6 coord: 719..755 e-value: 3.5E-4 score: 29.9 coord: 967..999 e-value: 160.0 score: 3.3 coord: 793..825 e-value: 180.0 score: 2.8 coord: 857..892 e-value: 0.12 score: 21.4
IPR006597	Sel1-like repeat	PFAM	PF08238	Sel1	coord: 600..632 e-value: 0.15 score: 12.7 coord: 838..856 e-value: 0.0089 score: 16.6 coord: 756..791 e-value: 0.036 score: 14.7 coord: 720..754 e-value: 0.5 score: 11.0 coord: 859..885 e-value: 0.011 score: 16.2
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 899..1059 e-value: 1.4E-4 score: 21.3 coord: 785..894 e-value: 1.8E-12 score: 46.8
IPR013320	Concanavalin A-like lectin/glucanase domain	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 326..458

Blast

[Close]

BLAST of TCONS_00045802-protein vs. Swiss-Prot (Human)
Match: SE1L3 (Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.691e-55
Identity = 246/979 (25.13%), Postives = 437/979 (44.64%), Query Frame = 0

Query:  152 GVYYEEISNAMPVKNVFFKHQFRYNFDEKISTNGTSIVNIPIPSQLIYYDHQNSTMFTNYFVS-KVEFKAMLV---ITDEQDGFEVTSTSVDSL-------DLLLQ--PPWDRDQKP-TYSFSWIGQIIDMLERRRIPKCQKHSDHKIISNIVPSLGQSSLGYLRKVQEARWPSHLPPALAQHLEHSVGMTITFWMFITKPCNSGGCFIIQQRNTTNFHSL-VVILNNEGKLHVQAHDSRGHGEAFVSLERLPHNKWIFVMIRVSVLDIKLKFNFNDQSHVYSYSRIYTSFNKGNNSFWASSGYFV------QETFSGYLAKFNVHQYESLDYQQYLKHFKDSDKQEINQIISEDSYQKCKAIKTMVNL---ALGHGILGKQTCSIE-EILYPKRPPNTCALKKKRPYWRELKALREKL--KVLRENWAKDKRDLHMMV-DVGAAIHKDVMKNLTK----KFTPDLMPLLNMAGCLGYGKSYFVLATIHQYGISNVEPNQDKALSYHLMAAQLSEPLSHLSLAYR-YQLTHNGLLNDLELQAAHTRQAAIITKNELDQEKYEIN-TQSELIRLDEANSYSDTRGGGSDLYKWLNQQAKMGSLEAKNQMADMLFHGKQGVEANQELAMEHFNDLA-DAGDPVAMVNLAVMHIKGINNMEKNVTKAKILLEKAVAKNSSFAYNVLGFIEIHYNQNATAAMHYWKKGVEYGDVQSTFNYASV--------MEQTNHTEALKYYEKAANQGDRHSIFRLAELLMEGTI--IKRDPQKALEYYKVIGEQHESLGWFMRHAMNHYLEGRRYSSIVNYLLALEGGLQLAGFNMALLLKEMD-----YNKENTMHLFDAKPLFFVNFTAELGWSTSLVEMGD-QSWTKENDTQKASL---YYTRAVQKNDHPEALYSLGYLVENQFSIDHSIL----IESASHWKEVHGNLTYAAKLYQSCMASQSENQEGYFPCQLALFKVQLKSL 1072
             V   E  +++PV      ++ R+  ++ + T+ T IV++  PS ++Y D        +YF+   +   A++V   IT +  G +      ++L         LLQ  PP++R  K       W    I  L   RIP+C   +D   +     +    + G ++K    R    L     Q +++ V  T++ W+++   C +  C I+   ++   +    V L  EG LH+Q H  +G   A  +   +P  +W  + I  +   I +  +      + SY     SF + +  +  ++GYF+           G+      ++  SL   Q      +  KQ   QI  +  Y++C  ++ +V++   A  HG   ++ C +    L  +R     ++ +  P+ +ELK     L   +L  +     R+ +  V ++G  I +  +K L+          ++P L  + C GY K+ + LA  ++ G+ NV  +Q + + Y L+  Q SE LS ++L Y+ YQ   N  L D EL  A+   + I TK  LDQ   + +    E IRL +            D++ WL  +A  G+  A+ ++A MLF G+QGV  N E A+E +   A +  DP  + + A++  KG   ++KN   A  L++KA +K    A N LG+    + +N   A  YW K  E G+  +++N   +        +   N T A +Y+ KAA  G        +   + G +    RDP+KA+ + K + E++  LG  +R  +N YLEG  + +++ Y+LA E G++++  N+A + +E       Y   N +  +    +F ++       S + ++MGD   +  +N +Q   L    Y +A    D  +  ++L  L+E    I H IL    I+S  H      N++   +LY+ C +    N+E + PC LA   + L+ L
Sbjct:  115 AVVSSEFRSSIPV------YKKRWKNEKHLHTSRTQIVHVKFPSIMVYRD--------DYFIRHSISVSAVIVRAWITHKYSGRDWNVKWEENLLHAVAKNYTLLQTIPPFERPFKDHQVCLEWNMGYIWNLRANRIPQCPLENDVVALLGFPYASSGENTGIVKKFPRFR-NRELEATRRQRMDYPV-FTVSLWLYLLHYCKANLCGILYFVDSNEMYGTPSVFLTEEGYLHIQMHLVKGEDLAVKTKFIIPLKEWFRLDISFNGGQIVVTTSIGQD--LKSYHNQTISFRE-DFHYNDTAGYFIIGGSRYVAGIEGFFGPLKYYRLRSLHPAQIFNPLLE--KQLAEQI--KLYYERCAEVQEIVSVYASAAKHGGERQEACHLHNSYLDLQRRYGRPSMCRAFPWEKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFEKAVKRLSSIDGLHQISSIVPFLTDSSCCGYHKASYYLAVFYETGL-NVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYPL-DWELSYAYY--SNIATKTPLDQHTLQGDQAYVETIRLKDDEILKVQTKEDGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKG-QGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAP-----SFAYLKMGDLYYYGHQNQSQDLELSVQMYAQAALDGDS-QGFFNLALLIEEGTIIPHHILDFLEIDSTLH----SNNISILQELYERCWS--HSNEESFSPCSLAWLYLHLRLL 1053

The following BLAST results are available for this feature:

BLAST of TCONS_00045802-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00045802-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SE1L3	1.691e-55	25.13	Protein sel-1 homolog 3 OS=Homo sapiens GN=SEL1L3 ...	[more]

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TCONS_00045802-protein (polypeptide) - C. hemisphaerica