TCONS_00045799-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045799-protein
Unique NameTCONS_00045799-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length278

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045799-protein ID=TCONS_00045799-protein|Name=TCONS_00045799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
MASQNTCVKQVLIHPTALFTIIDSYERRNEDAKRVIGTLLGRVEKNGVVE
VTNCFTVPHVETQDEVALDKEYAISMLDLHKQASRTEDIVGWFATSDDVT
DHSTLIHEYYSIATDNPIHFTVDTQMKNGRMAMKAYVSSTMGVPGGTTGL
IFTPIPHQIKYEKAEAVAVETFSRNKGGSKSPAVLQNGVHHVSRSTDVLV
DRLKETLQYVKEVVNGDRVGDNEIGRKLMSIVGSVPQMEASQVEQMMNNN
MQDLLMVLYLSSLTKSQLSVGNKLNSIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029276XLOC_029276Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045799TCONS_00045799Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR024969Rpn11/EIF3F_C
IPR027531eIF3f
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003743 translation initiation factor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 10..141
e-value: 9.8E-26
score: 101.5
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 8..111
e-value: 6.4E-22
score: 77.6
NoneNo IPR availableGENE3D3.40.140.10coord: 8..100
e-value: 3.7E-8
score: 32.6
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 164..274
e-value: 7.0E-22
score: 77.9
IPR027531Eukaryotic translation initiation factor 3 subunit FHAMAPMF_03005eIF3fcoord: 9..277
score: 35.621
IPR027531Eukaryotic translation initiation factor 3 subunit FCDDcd08064MPN_eIF3fcoord: 11..274
e-value: 2.29604E-123
score: 354.59

Blast
[Close]
BLAST of TCONS_00045799-protein vs. Swiss-Prot (Human)
Match: EIF3F (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 9.521e-88
Identity = 130/266 (48.87%), Postives = 182/266 (68.42%), Query Frame = 0 
Query:    9 KQVLIHPTALFTIIDSYERRNEDAKRVIGTLLGRVEKNGVVEVTNCFTVPHVETQDEVALDKEYAISMLDLHKQASRTEDIVGWFATSDDVTDHSTLIHEYYSIATDNPIHFTVDTQMKNGRMAMKAYVSSTMGVPGGTTGLIFTPIPHQIKYEKAEAVAVETFSRNKGGSKSPAVLQNGVHHVSRSTDVLVDRLKETLQYVKEVVNGDRVGDNEIGRKLMSIVGSVPQMEASQVEQMMNNNMQDLLMVLYLSSLTKSQLSVGNKL 274
            + V +HP  L +I+DSYERRNE A RVIGTLLG V+K+ V EVTNCF+VPH E++DEVA+D E+A +M +LHK+ S  E I+GW+AT  D+T+HS LIHEYYS    NPIH TVDT ++NGRM++KAYVS+ MGVPG T G++FTP+  +  Y   E + V+   +          L + +  V  ++  + D L   LQY ++V++G    DN +GR LMS+V  VP++     E M+N+N+ DLLMV YL++LT+SQ+++  KL
Sbjct:   90 RVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 354
The following BLAST results are available for this feature:
BLAST of TCONS_00045799-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EIF3F9.521e-8848.87Eukaryotic translation initiation factor 3 subunit... [more]
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