TCONS_00045758-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045758-protein
Unique NameTCONS_00045758-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045758-protein ID=TCONS_00045758-protein|Name=TCONS_00045758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
SHVKILKVVFQQLCEKIDRVRVKAGQLLYQLLYFKKDMGALPCIEQLREI
LSKSKEETINWAVPNEAFAIIEKLLSIKPYQYSLILGISISAGGITESLA
RHATDCVLNFLGENQESIEEMDRISEHFLNILKTHNKNDRVIVPLLKLLE
RLFSSGCFDVYLDSDTDSLSDFPQKLLTLVKEECKGCGDIKKLLVVVNIF
CCLVQFEGEVRTKSLQHLFMFLCHKYPRVRRVTAEQLYTTFLTYDDIVCE
DEQENVMNILTDVSWDQNIEMVRPERNKLCEIFGLPIPKLKKVTKQSSAT
PVKKDELDSYKDLVSRLQGY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029238XLOC_029238Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045758TCONS_00045758Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022577Tubulin_specific_chaperoneD_C
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022577Tubulin-specific chaperone D, C-terminalPFAMPF12612TFCD_Ccoord: 4..192
e-value: 3.6E-51
score: 173.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..273
e-value: 4.8E-11
score: 41.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..269

Blast
[Close]
BLAST of TCONS_00045758-protein vs. Swiss-Prot (Human)
Match: TBCD (Tubulin-specific chaperone D OS=Homo sapiens GN=TBCD PE=1 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.493e-62
Identity = 110/288 (38.19%), Postives = 176/288 (61.11%), Query Frame = 0 
Query:    4 KILKVVFQQLCEKIDRVRVKAGQLLYQLLYF-KKDMGALPCIEQLREILSKSKEETINWAVPNEAFAIIEKLLSIKPYQYSLILGISISAGGITESLARHATDCVLNFLGENQESIEEMDRISEHFLNILKTHNKNDRVIVPLLKLLERLFSSGCFDVYLDSDTDSLSDFPQKLLTLVKEECKGCGDIKKLLVVVNIFCCLVQFEGEVRTKSLQHLFMFLCHKYPRVRRVTAEQLYTTFLTYDDIVCEDEQENVMNILTDVSWDQNIEMVRPERNKLCEIFGLPIPKL 290
            +I+  V QQ  EKIDR R  A  +   LL+F    +  +P   +L ++  +S   ++NW+ P++AF  I +LL +  Y+Y ++LG+ +S GG+TES  RH+T  +  ++   Q   + +   S   L I + +  N+RV VPLLK L+ + + GCFD++    T+    F  KLL L K+E K   DI+KLL  + +FC +VQF G+VR ++L  L + LCH++P +R+ TA Q+Y T LTY D+V  D  + V+ +L+D +WD  + +VR +RN+LC++ G+P P+L
Sbjct:  901 RIMCCVAQQASEKIDRFRAHAASVFLTLLHFDSPPIPHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQLLGLPTYRYHVLLGLVVSLGGLTESTIRHSTQSLFEYMKGIQSDPQALGSFSGTLLQIFEDNLLNERVSVPLLKTLDHVLTHGCFDIF---TTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCEMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGVPRPQL 1185
The following BLAST results are available for this feature:
BLAST of TCONS_00045758-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD1.493e-6238.19Tubulin-specific chaperone D OS=Homo sapiens GN=TB... [more]
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