TCONS_00045718-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045718-protein
Unique NameTCONS_00045718-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045718-protein ID=TCONS_00045718-protein|Name=TCONS_00045718-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
TELKLENKKQQNLNTQSYKMSDVPQDAPESCPGTQSEAAGKASACGGCPN
QKICASGAPKQQDPGVKEVKWRLASVKHKIIVLSGKGGVGKSTFTSTLAY
GLAQNPAHQVGVLDIDICGPSMPKILGVEGEQVHQSGSGWSPVFVDDNLS
VMSIGFLLQSDSDAVIWRGPRKNGLIKQFLKDVDWGDLEYLVIDTPPGTS
DEHLSLVQYLAETAVDGAVIITTPQEVALLDVRKEIDFCKKVKLPIIGIV
QNMSSFICPKCKHESQPFPPTTGGAQALADEYGLKLLGCLPLDPRIGKCC
DEGKSFLAEYPDTQTAISYQKVVNGIQKHCETT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029219XLOC_029219Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045718TCONS_00045718Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033756YlxH/NBP35
IPR028601NUBP1/Nbp35
IPR019591Mrp/NBP35_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0051536 iron-sulfur cluster binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033756Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35PFAMPF10609ParAcoord: 76..326
e-value: 2.5E-97
score: 325.0
NoneNo IPR availableGENE3D3.40.50.300coord: 60..305
e-value: 1.4E-64
score: 217.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
IPR028601Cytosolic Fe-S cluster assembly factor NUBP1/Nbp35HAMAPMF_03038NUBP1coord: 24..331
score: 49.275
IPR019591Mrp/NBP35 ATP-binding proteinHAMAPMF_02040Mrp_NBP35coord: 71..327
score: 36.645
IPR019591Mrp/NBP35 ATP-binding proteinCDDcd02037MRP-likecoord: 79..294
e-value: 2.33765E-90
score: 269.334
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 63..309

Blast
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BLAST of TCONS_00045718-protein vs. Swiss-Prot (Human)
Match: NUBP1 (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Homo sapiens GN=NUBP1 PE=1 SV=2)

HSP 1 Score: 435.261 bits (1118), Expect = 3.105e-154
Identity = 196/306 (64.05%), Postives = 254/306 (83.01%), Query Frame = 0 
Query:   25 QDAPESCPGTQSEAAGKASACGGCPNQKICASGAPKQQDPGVKEVKWRLASVKHKIIVLSGKGGVGKSTFTSTLAYGLAQNPAHQVGVLDIDICGPSMPKILGVEGEQVHQSGSGWSPVFVDDNLSVMSIGFLLQSDSDAVIWRGPRKNGLIKQFLKDVDWGDLEYLVIDTPPGTSDEHLSLVQYLAETAVDGAVIITTPQEVALLDVRKEIDFCKKVKLPIIGIVQNMSSFICPKCKHESQPFPPTTGGAQALADEYGLKLLGCLPLDPRIGKCCDEGKSFLAEYPDTQTAISYQKVVNGIQKHC 330
            ++ P  CPG  S  AG+ ++C GCPNQ++CASGA    D  ++E+K ++ +VKHKI+VLSGKGGVGKSTF++ LA+GLA++   Q+ +LDIDICGPS+PKI+G+EGEQVHQSGSGWSPV+V+DNL VMS+GFLL S  DAVIWRGP+KNG+IKQFL+DVDWG+++YL++DTPPGTSDEHLS+V+YLA   +DGAVIITTPQEV+L DVRKEI+FC+KVKLPIIG+V+NMS FICPKCK ESQ FPPTTGGA+ +  +  + LLG +PLDP IGK CD+G+SF  + PD+   ++Y+ ++  IQ+ C
Sbjct:    2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVRYLATAHIDGAVIITTPQEVSLQDVRKEINFCRKVKLPIIGVVENMSGFICPKCKKESQIFPPTTGGAELMCQDLEVPLLGRVPLDPLIGKNCDKGQSFFIDAPDSPATLAYRSIIQRIQEFC 307
The following BLAST results are available for this feature:
BLAST of TCONS_00045718-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUBP13.105e-15464.05Cytosolic Fe-S cluster assembly factor NUBP1 OS=Ho... [more]
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