TCONS_00045661-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045661-protein
Unique NameTCONS_00045661-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length336

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045661-protein ID=TCONS_00045661-protein|Name=TCONS_00045661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MAASRDHGKNNTSGYSSSSSDEDVNIGFPFEFLETADFQCIICTHVIRGF
TELPCGHAGCKLCIEEWEKRKVACCECQTAYDKTKKHGSLYNDRKIKHEK
QAHCKQHEKGCTWQGSIDDYKQQHRKKCAFRNVRCRLCNQKVARHEKEGH
KLTCTHRLVNCTTCGAQYRFINKKKHEDEECKVPCDYWQYGCHEMIHKRH
MERHLANSARRHIELVKAHYDRIVAENNWSLAEKDKEIGVLKTRVLSQSE
RIMELEGKEIPMDIPMCYKDESLAGKDWLLAEKDKEIGILKTRVLSQSER
ITELEGKEIPMDTQSGTKCLAKKGNSPGCFETTIDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029194XLOC_029194Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045661TCONS_00045661Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 144..205
e-value: 0.016
score: 14.9
coord: 94..143
e-value: 6.4E-8
score: 32.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 33..90
e-value: 2.6E-9
score: 35.9
NoneNo IPR availableGENE3D1.20.5.730coord: 218..314
e-value: 0.0034
score: 16.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 30..83
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 40..78
score: 9.598
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 102..168

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045661-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top