TCONS_00045655-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045655-protein
Unique NameTCONS_00045655-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length217

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045655-protein ID=TCONS_00045655-protein|Name=TCONS_00045655-protein|organism=Clytia hemisphaerica|type=polypeptide|length=217bp
CNHEIIKSSDHKDCSKKNRTIFFTHTKHKTRQDFLKRYTKESSVHHFATI
MDMKHMTHENNKTGMDMGMDMDMPMYFHGGTMVTLFFKDWMTMSQKEFNG
ACVALFLVSALYEGLKVLRKLIVPGKRIQCSAQSANFTSNNNGPPTLQQR
LIVHLIQTVLHIIQVFLGYLLMLAFMTYNSLVCVSILLGYGFGYLVFAWW
TPMVPGGDGEDADCCNM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029190XLOC_029190Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045655TCONS_00045655Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter
Vocabulary: Biological Process
TermDefinition
GO:0035434copper ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005375copper ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035434 copper ion transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005375 copper ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 75..197
e-value: 1.2E-25
score: 90.8

Blast
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BLAST of TCONS_00045655-protein vs. Swiss-Prot (Human)
Match: COPT1 (High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.397e-23
Identity = 65/188 (34.57%), Postives = 92/188 (48.94%), Query Frame = 0 
Query:   25 HTKHKTRQDFLKRYTKESSVHHFATIMDMKHMTHENNKTGMDMGMDMDMPMYFHGG-TMVTLFFKDWMTMSQKEFNGACVALFLVSALYEGLKVLRKLIVPGKRIQCSAQSANFTSNN-----NGPPTLQQRLIV--HLIQTVLHIIQVFLGYLLMLAFMTYNSLVCVSILLGYGFGYLVFAWWTPMV 204
            H+ H          T + S HH  T     H        G D  M M MPM F+ G   V L F   +  +  E  GA VA+FL++  YEGLK+ R+ ++   ++     S      N         T+ Q+++   HL+QTVLHIIQV + Y LML FMTYN  +C+++  G G GY +F+W   +V
Sbjct:    3 HSHHMGMSYMDSNSTMQPSHHHPTTSASHSH-------GGGDSSMMM-MPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVV 182
The following BLAST results are available for this feature:
BLAST of TCONS_00045655-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COPT15.397e-2334.57High affinity copper uptake protein 1 OS=Homo sapi... [more]
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