TCONS_00045639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045639-protein
Unique NameTCONS_00045639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045639-protein ID=TCONS_00045639-protein|Name=TCONS_00045639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
RFGRRPTTCGNWVISGVSCMGVAFIPTHGVYNWIRVAFGMLGKLSVTLAF
SALFVWSVELYPTVIRSQGMGLMNVVSRIGGAYAPWVAQYVGNFNKYLPF
LVMGSLSLISAALCYKLNETTGMALAETLEDFNQSDSKESKTMTTIIEND
FTKEDEKDQKENTSV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029184XLOC_029184Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045639TCONS_00045639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..145
e-value: 2.1E-21
score: 75.6
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 1..131
e-value: 1.8E-11
score: 43.4
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 1..122
score: 11.271
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 1..117
e-value: 7.55637E-11
score: 56.9385
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 1..124

Blast
[Close]
BLAST of TCONS_00045639-protein vs. Swiss-Prot (Human)
Match: S22AD (Solute carrier family 22 member 13 OS=Homo sapiens GN=SLC22A13 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.049e-25
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 0 
Query:    1 RFGRRPTTCGNWVISGVSCMGVAFIPTHGVYNWIRVAFGMLGKLSVTLAFSALFVWSVELYPTVIRSQGMGLMNVVSRIGGAYAPWVAQYVGNFNKYLPFLVMGSLSLISAALCYKLNETTGMALAETLEDFNQSDSKESKTMTTIIENDFTKEDEKDQKENTS 164
            RFGR+ +  G  V+ G+ C+ + FIP       +     ++GK++   AF+  +V+S EL+PT++R  GMGL+ + SRIGG   P V   +G ++  LP L+ GSL +++  LC  L ET G  L +TL+D        S             E E + K  TS
Sbjct:  386 RFGRKWSQLGTLVLGGLMCIIIIFIPAD--LPVVVTMLAVVGKMATAAAFTISYVYSAELFPTILRQTGMGLVGIFSRIGGILTPLVI-LLGEYHAALPMLIYGSLPIVAGLLCTLLPETHGQGLKDTLQDLELGPHPRSP-------KSVPSEKETEAKGRTS 539
The following BLAST results are available for this feature:
BLAST of TCONS_00045639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AD2.049e-2534.15Solute carrier family 22 member 13 OS=Homo sapiens... [more]
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