TCONS_00045386-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045386-protein
Unique NameTCONS_00045386-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045386-protein ID=TCONS_00045386-protein|Name=TCONS_00045386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=105bp
MGAYKYLEELYKRKQCDLLRFLFRVRCWQLRHLNTIHRASRPTRPDKARR
LGYKAKQGYVVYRVRVRRGGRKKPLPKGITYGKPKGEGINQIKFQRSIRS
VAEVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028966XLOC_028966Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045386TCONS_00045386Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000439Ribosomal_L15e
IPR024794Rbsml_L15e_core_dom
IPR020925Ribosomal_L15e_CS
IPR012678Ribosomal_L23/L15e_core_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000439Ribosomal protein L15eSMARTSM01384Ribosomal_L15e_2coord: 2..105
e-value: 2.2E-32
score: 123.6
IPR000439Ribosomal protein L15ePFAMPF00827Ribosomal_L15ecoord: 2..103
e-value: 1.6E-43
score: 148.5
IPR024794Ribosomal protein L15e core domainGENE3D3.40.1120.10coord: 2..105
e-value: 1.0E-48
score: 165.0
IPR020925Ribosomal protein L15e, conserved sitePROSITEPS01194RIBOSOMAL_L15Ecoord: 46..69
IPR012678Ribosomal protein L23/L15e core domainSUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 1..103

Blast
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BLAST of TCONS_00045386-protein vs. Swiss-Prot (Human)
Match: RL15 (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.184e-53
Identity = 75/103 (72.82%), Postives = 92/103 (89.32%), Query Frame = 0 
Query:    1 MGAYKYLEELYKRKQCDLLRFLFRVRCWQLRHLNTIHRASRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKKPLPKGITYGKPKGEGINQIKFQRSIRSVAE 103
            MGAYKY++EL+++KQ D++RFL RVRCWQ R L+ +HRA RPTRPDKARRLGYKAKQGYV+YR+RVRRGGRK+P+PKG TYGKP   G+NQ+KF RS++SVAE
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAE 103
The following BLAST results are available for this feature:
BLAST of TCONS_00045386-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RL151.184e-5372.8260S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
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