TCONS_00045061-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045061-protein
Unique NameTCONS_00045061-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045061-protein ID=TCONS_00045061-protein|Name=TCONS_00045061-protein|organism=Clytia hemisphaerica|type=polypeptide|length=107bp
QLYFQQFLKNILAILTSIKAQEEGKSNPEQQPQPAVPVKETRKIGTENRY
DRFYQERFDSQKATEGFKIDTMATFHGLDLQSVKEGKSQRRNAPAPSPHN
PIKSSSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028645XLOC_028645Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045061TCONS_00045061Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032041Cdc73_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032041Paf1 complex subunit Cdc73, N-terminal domainPFAMPF16050CDC73_Ncoord: 5..57
e-value: 9.1E-8
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..107

Blast
[Close]
BLAST of TCONS_00045061-protein vs. Swiss-Prot (Human)
Match: CDC73 (Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.687e-21
Identity = 50/98 (51.02%), Postives = 65/98 (66.33%), Query Frame = 0 
Query:    5 QQFLKNILAILTSIKAQEEGKSNPEQQPQP-AVPVKETRKIG--TENRYDRFYQERFDSQKATEGFKIDTMATFHGLDLQSVKEGKSQRRN-APAPSP 98
            + F KNI AIL S+KA+EEG++ PEQ+P P A PV  T +        Y+R+ QERF  ++ TEGFKIDTM T+HG+ L+SV EG S R+   PA  P
Sbjct:  243 KNFSKNIFAILQSVKAREEGRA-PEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERFKGKEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQP 339
The following BLAST results are available for this feature:
BLAST of TCONS_00045061-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC731.687e-2151.02Parafibromin OS=Homo sapiens GN=CDC73 PE=1 SV=1[more]
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