TCONS_00044907-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044907-protein
Unique NameTCONS_00044907-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044907-protein ID=TCONS_00044907-protein|Name=TCONS_00044907-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
SGSLLQSITDATISDIGINSAGSVIYLAYGNSVKMIDMKTYSTLGKLTGH
TGAVTCLLVANTGHNHDNVITGSKDHYIKIYEVVDEVASSQMPRTNLEPP
HYDGVESLAMKGDVIFSGSRDNTIKKWNYANHALENHMTSAHKDWVTTLN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028505XLOC_028505Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044907TCONS_00044907Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..37
e-value: 470.0
score: 0.1
coord: 90..128
e-value: 0.78
score: 17.7
coord: 40..82
e-value: 4.6E-4
score: 29.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 101..128
e-value: 0.19
score: 12.5
coord: 43..81
e-value: 8.7E-5
score: 23.1
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 78..150
e-value: 4.1E-9
score: 35.5
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 1..51
e-value: 2.0E-4
score: 20.1
NoneNo IPR availableGENE3D2.80.10.50coord: 52..77
e-value: 8.2E-5
score: 22.2
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 47..150
score: 13.369
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 11..147

Blast
[Close]
BLAST of TCONS_00044907-protein vs. Swiss-Prot (Human)
Match: KI21B (Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 2.996e-44
Identity = 66/137 (48.18%), Postives = 95/137 (69.34%), Query Frame = 0 
Query:   13 ISDIGINSAGSVIYLAYGNSVKMIDMKTYSTLGKLTGHTGAVTCLLVANTGHNHDNVITGSKDHYIKIYEVVDEVASSQMPRTNLEPPHYDGVESLAMKGDVIFSGSRDNTIKKWNYANHALENHMTSAHKDWVTTL 149
            I+ I ++ +G+++Y A GN+V++ ++  +  +GKLTGH G V CL V  T   HD V+TGSKDHY+K++E+ + V  +  P  N EPPHYDG+E LA++GD++FSGSRDN IKKW+     L   + +AHKDWV  L
Sbjct: 1415 INQIALSPSGTMLYAASGNAVRIWELSRFQPVGKLTGHIGPVMCLTVTQTASQHDLVVTGSKDHYVKMFELGECVTGTIGPTHNFEPPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQQIPNAHKDWVCAL 1551
The following BLAST results are available for this feature:
BLAST of TCONS_00044907-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KI21B2.996e-4448.18Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF... [more]
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