TCONS_00044844-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044844-protein
Unique NameTCONS_00044844-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length419

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044844-protein ID=TCONS_00044844-protein|Name=TCONS_00044844-protein|organism=Clytia hemisphaerica|type=polypeptide|length=419bp
EEVSDSQHQSDSFDIKIELDEILPPTNLTTHATNLQVENPITKTRKNSLV
TKERGKSFICKDCGKSFNFNCDLKRHFRIHTGERPFKCQECGKCFTQESS
FNAHLKIHSDIESFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKY
FKTKNYLINHNRRHTGEKPFKCQECGKFFTRKGSLKDHMRIHTGQKPFKC
EECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSWKESLKGHMRVHSG
EQPFECKECGKCFSERSNLYRHMYLHSEIKPFNCAKCGKQFSQRGNLIRH
SNMHNGIKSFKCKECGKCFSRKYILNNHIKTHKRIKHVQIEGKEKPFRCN
KCGKCFNSLSNFTAHIKSYSKEIVQPDGKSESTELSTKIHQNQNLFDVAS
LIVENEDERRLRKITHLKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028449XLOC_028449Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044844TCONS_00044844Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 198..220
e-value: 4.7E-5
score: 32.8
coord: 226..248
e-value: 9.6E-5
score: 31.8
coord: 58..80
e-value: 0.017
score: 24.3
coord: 142..164
e-value: 0.056
score: 22.6
coord: 282..304
e-value: 0.0054
score: 26.0
coord: 347..367
e-value: 8.9
score: 13.7
coord: 170..192
e-value: 1.5E-5
score: 34.5
coord: 254..276
e-value: 0.0014
score: 27.9
coord: 114..136
e-value: 8.0E-5
score: 32.0
coord: 86..108
e-value: 5.7E-4
score: 29.2
coord: 310..332
e-value: 0.0019
score: 27.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 284..304
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 172..192
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 60..80
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 256..276
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 144..164
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 116..136
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 228..248
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 312..332
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 200..220
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 88..108
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 347..372
score: 10.658
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 226..253
score: 16.955
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 142..169
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 198..225
score: 17.08
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 282..309
score: 13.942
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 170..197
score: 17.766
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 86..113
score: 13.484
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 254..281
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 58..85
score: 16.727
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 114..141
score: 14.752
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 310..337
score: 13.069
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 122..179
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 280..332
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 179..235
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 337..371
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 235..291
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 56..108
NoneNo IPR availableGENE3D3.30.160.60coord: 273..294
e-value: 1.1E-14
score: 53.6
coord: 113..130
e-value: 1.5E-10
score: 40.4
NoneNo IPR availableGENE3D2.40.155.10coord: 131..168
e-value: 4.1E-22
score: 78.9
NoneNo IPR availableGENE3D2.30.30.380coord: 70..91
e-value: 2.1E-11
score: 43.3
NoneNo IPR availableGENE3D2.40.155.10coord: 185..221
e-value: 3.7E-31
score: 108.5
NoneNo IPR availableGENE3D3.30.160.60coord: 359..391
e-value: 2.5E-7
score: 30.2
NoneNo IPR availableGENE3D3.30.160.60coord: 340..358
e-value: 1.3E-7
score: 31.4
coord: 295..319
e-value: 1.2E-16
score: 60.3
coord: 239..261
e-value: 1.4E-19
score: 69.7
NoneNo IPR availableGENE3D3.30.160.60coord: 169..184
e-value: 1.2E-17
score: 63.2
NoneNo IPR availableGENE3D3.30.160.60coord: 320..339
e-value: 1.4E-4
score: 21.4
NoneNo IPR availableGENE3D3.30.160.60coord: 222..238
e-value: 2.5E-17
score: 62.3
NoneNo IPR availableGENE3D3.30.160.60coord: 25..69
e-value: 1.4E-10
score: 40.6
NoneNo IPR availableGENE3D3.30.160.60coord: 262..272
e-value: 8.6E-7
score: 28.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 114..136
e-value: 8.1E-7
score: 29.1
coord: 254..276
e-value: 6.5E-5
score: 23.1
coord: 198..220
e-value: 3.1E-4
score: 21.0
coord: 347..367
e-value: 8.2E-5
score: 22.7
coord: 226..248
e-value: 4.3E-4
score: 20.5
coord: 282..304
e-value: 4.8E-4
score: 20.3
coord: 310..332
e-value: 9.5E-5
score: 22.5
coord: 143..164
e-value: 0.0018
score: 18.5
coord: 86..108
e-value: 5.8E-5
score: 23.2
coord: 58..80
e-value: 2.4E-4
score: 21.3
coord: 170..192
e-value: 1.6E-6
score: 28.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 92..112
e-value: 1.3E-16
score: 59.8

Blast
BLAST of TCONS_00044844-protein vs. Swiss-Prot (Human)
Match: ZN568 (Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 9.114e-99
Identity = 150/317 (47.32%), Postives = 207/317 (65.30%), Query Frame = 0
Query:   56 KSFICKDCGKSFNFNCDLKRHFRIHTGERPFKCQECGKCFTQESSFNAHLKIHSDIESFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLINHNRRHTGEKPFKCQECGKFFTRKGSLKDHMRIHTGQKPFKCEECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSERSNLYRHMYLHSEIKPFNCAKCGKQFSQRGNLIRHSNMHNGIKSFKCKECGKCFSRKYILNNHIKTHKRIKHVQIEGKEKPFRCNKCGKCFNSLSNFTAHIKSYSKE 372
            K + CKDC K+F+   +L  H RIHTGE+P++C+ECGK F+Q+ +   H KIH+  + + C ECG++F     +  H+R HTGE   +C +CGK F   +  I H R HTGEKP+ C ECGK F++  SL  HMR HT +KP++C+ECGK FS KE+L  H ++H+GE+P+EC ECGK F    +L  H R+H+GE+P+ C  CGK FS++SNL  H  +H+  KP++C +CGK FSQR NL+ H  +H G K FKC ECGK FSR   L  H+++H           EKP+ CNKCGK F+  S    H++S++ E
Sbjct:  304 KPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHT---------GEKPYECNKCGKAFSQCSLLIIHMRSHTGE 611          

HSP 2 Score: 306.22 bits (783), Expect = 4.672e-98
Identity = 156/336 (46.43%), Postives = 208/336 (61.90%), Query Frame = 0
Query:   56 KSFICKDCGKSFNFNCDLKRHFRIHTGERPFKCQECGKCFTQESSFNAHLKIHSDIESFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLINHNRRHTGEKPFKCQECGKFFTRKGSLKDHMRIHTGQKPFKCEECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSERSNLYRHMYLHSEIKPFNCAKCGKQFSQRGNLIRHSNMHNGIKSFKCKECGKCFSRKYILNNHIKTH-------------------KRIKHVQIEGKEKPFRCNKCGKCFNSLSNFTAHIKSYSKE 372
            K + CK+CGK+F+   +L  H +IHTGE+P+KC ECGK F Q S+   H +IH+  + + C++C K+F  K  L  H R HTGE    C+ECGK F  K  LI H + HTGEKP+ C ECG+ F+R  S+  HMR HTG+KP+KC +CGK FS       HMR H+GE+P+ C ECGK FS   SL  HMR H+ E+P+ECKECGK FS + NL  H  +H+  KP+ C++CGK F Q  NLIRH  +H G K + C  CGK FS+K  L  H K H                     ++H +I   EKPF+CN+CGK F+ +S+ T H++S++ E
Sbjct:  248 KPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGE 583          

HSP 3 Score: 268.855 bits (686), Expect = 7.751e-84
Identity = 134/298 (44.97%), Postives = 189/298 (63.42%), Query Frame = 0
Query:   44 TRKNSLVTKER----GKSFICKDCGKSFNFNCDLKRHFRIHTGERPFKCQECGKCFTQESSFNAHLKIHSDIESFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLINHNRRHTGEKPFKCQECGKFFTRKGSLKDHMRIHTGQKPFKCEECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSWKESLKGHMRVHSGEQPFECKECGKCFSERSNLYRHMYLHSEIKPFNCAKCGKQFSQRGNLIRHSNMHNGIKSFKCKECGKCFSRKYILNNHIKTHKRIKH 337
            ++K +L+  E+     K + C +CG++F+    +  H R HTGE+P+KC +CGK F+Q S F  H++ H+  + + C ECGK+F     L  H+R HT E    C+ECGK F  K  LI H + HTGEKP++C ECGK F +  +L  H RIHTG+KP+ C  CGK FS K +L  H ++H+GE+P+ C +CGK FS +++L  H ++H+GE+PF+C ECGK FS  S+L  H+  H+  KP+ C KCGK FSQ   LI H   H G K F+C ECGK FS++  L+ H + H   +H
Sbjct:  344 SQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGEKPFECNECGKAFSQRASLSIHKRGHTGERH 641          
The following BLAST results are available for this feature:
BLAST of TCONS_00044844-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5689.114e-9947.32Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 ... [more]
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