TCONS_00044712-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044712-protein
Unique NameTCONS_00044712-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length473

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044712-protein ID=TCONS_00044712-protein|Name=TCONS_00044712-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
MTVADIIEKDYYFITFDLKSGYHHVPIDQAYQTFLGFSWVVDDTTKYFEF
LVLPFGLSSACYLFTKLMRPLIKRWRSKSVRCVIYLDDGIAGHKSESKLN
EITEEMTKDLRSAGLMINIKKSQLSPSKTGQWLGFCIDTSQMKFFVPKAK
IEKLNELILRTLCFKLVSAHQIPKIAGHLVSMAIAIGPLVYLFTRHMYKF
IESRASWYGKRIIGDDLKQELEFWQINLENSNGYSMKHNPTCSKIVYSDA
SSKGYGGYTVEKGSMLVAKGVFKTSQINTSSTYRELLAVKFILESFVAFL
KTESVKWFTDNHNVVSIIKKGSTKIHLQQKATEIYCYCLRNDISLNPVWI
PRDQNQISDHFSKVIDTDNWSIDNESFCYIQDNFGKFTADRFSDNMNKKV
DVFNSESFCPNSSGVDCFTRDWKNDFNWICPPTKLIGKTLLHLKNCKAKG
VLFVPFXIGFVHQQNLSVKPCFI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028327XLOC_028327Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044712TCONS_00044712Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 55..142
e-value: 8.0E-16
score: 57.4
NoneNo IPR availableGENE3D3.10.10.10coord: 2..54
e-value: 2.9E-5
score: 23.3
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 16..135
e-value: 9.34804E-24
score: 94.7179
NoneNo IPR availableCDDcd09275RNase_HI_RT_DIRS1coord: 245..362
e-value: 9.71602E-16
score: 72.3159
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..331
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 8..135
e-value: 2.9E-19
score: 69.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..137
score: 17.239
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 242..364
e-value: 3.3E-4
score: 19.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044712-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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