TCONS_00044519-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044519-protein
Unique NameTCONS_00044519-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044519-protein ID=TCONS_00044519-protein|Name=TCONS_00044519-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
MQLFSILGLEAHGGYTFCGYAALALLGQEQKANTKKLLKWTVNRQMKFEG
GFQGRTNKLVDGCYSFWQGALLPIIHNILQMYGDEDLSQENWMFNQKALE
EYILVNCQSYSGGLLDKPGKSRDYYHTCYCLSGLSIAEHFIVDDVRESKE
IVGGKKNVLVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028142XLOC_028142Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044519TCONS_00044519Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001330PFTB_repeat
IPR008930Terpenoid_cyclase/PrenylTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 5..160
e-value: 5.1E-61
score: 206.3
IPR001330PFTB repeatPFAMPF00432Prenyltranscoord: 10..27
e-value: 0.0019
score: 17.8
coord: 33..75
e-value: 9.1E-8
score: 31.6
coord: 99..137
e-value: 8.1E-7
score: 28.6
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 7..146

Blast
[Close]
BLAST of TCONS_00044519-protein vs. Swiss-Prot (Human)
Match: FNTB (Protein farnesyltransferase subunit beta OS=Homo sapiens GN=FNTB PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.456e-67
Identity = 97/158 (61.39%), Postives = 120/158 (75.95%), Query Frame = 0 
Query:    6 ILGLEAHGGYTFCGYAALALLGQEQKANTKKLLKWTVNRQMKFEGGFQGRTNKLVDGCYSFWQGALLPIIHNILQMYGDEDLSQENWMFNQKALEEYILVNCQSYSGGLLDKPGKSRDYYHTCYCLSGLSIAEHF----IVDDVRESKEIVGGKKNVL 159
            + G+EAHGGYTFCG AAL +L +E+  N K LL+W  +RQM+FEGGFQGR NKLVDGCYSFWQ  LLP++H  L   GD  LS  +WMF+Q+AL+EYIL+ CQ  +GGLLDKPGKSRD+YHTCYCLSGLSIA+HF    ++ DV     ++G  +N L
Sbjct:  242 VPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDV-----VLGVPENAL 394
The following BLAST results are available for this feature:
BLAST of TCONS_00044519-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FNTB4.456e-6761.39Protein farnesyltransferase subunit beta OS=Homo s... [more]
back to top