TCONS_00044014-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044014-protein
Unique NameTCONS_00044014-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044014-protein ID=TCONS_00044014-protein|Name=TCONS_00044014-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
SGHDLSIASGHSKKIFVIKFHPEDRNVFLSASWDRTVKIWDLRTEYAVRT
INGPYVCGDGVDLFQGKIVSASWKAQDALQLWDYGSGKLISTLSWPTTNR
RGEYLYCARFWDNSHVVAGGSGTNDLKMINITSNEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027670XLOC_027670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044014TCONS_00044014Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR0110426-blade_b-propeller_TolB-like
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 86..130
e-value: 70.0
score: 5.3
coord: 1..41
e-value: 5.1E-7
score: 39.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 8..50
score: 14.953
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 57..136
e-value: 2.5E-5
score: 23.1
NoneNo IPR availableGENE3D2.80.10.50coord: 3..56
e-value: 7.7E-11
score: 41.7
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 8..92
score: 13.738
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 7..133

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044014-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top