TCONS_00044013-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044013-protein
Unique NameTCONS_00044013-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044013-protein ID=TCONS_00044013-protein|Name=TCONS_00044013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=158bp
MRACAMENGDHSGICSNAMQLKDSVQEEERDLLFNPNNFKCRQQVSFPIW
ARKVCKSKPEHRTPEQLHNIVSIMRQLKDFRKYSKKMQLLLAKIARYEGF
GRRRVVIRKGHFGVCFYFVFSGSVGVVIDTDEDKAFDKDGRSEFTSFFCT
LLIFIEDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027669XLOC_027669Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044013TCONS_00044013Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 17..153
e-value: 1.9E-13
score: 49.7
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 79..133
score: 7.208
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 59..132

Blast
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BLAST of TCONS_00044013-protein vs. Swiss-Prot (Human)
Match: CNBD2 (Cyclic nucleotide-binding domain-containing protein 2 OS=Homo sapiens GN=CNBD2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.651e-20
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 0 
Query:   47 FPIWARKVCKSKPEHRTPEQLHNIVSIMRQLKDFRKYSKKMQLLLAKIARYEGFGRRRVVIRKGHFGVCFYFVFSGSVGVVIDTDEDKAF 136
            FP  A ++ + KP  RT +++  + +I++ L  +R Y++ +QLLLAK+ R+E FGRRRV+I+KG  G  FYF++ G+V +  D D   AF
Sbjct:   84 FPPKAIQIMQKKPSWRTEDEIQAVCNILQVLDSYRNYAEPLQLLLAKVMRFERFGRRRVIIKKGQKGNSFYFIYLGTVAITKDEDGSSAF 173
The following BLAST results are available for this feature:
BLAST of TCONS_00044013-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNBD23.651e-2042.22Cyclic nucleotide-binding domain-containing protei... [more]
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