TCONS_00043959-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043959-protein
Unique NameTCONS_00043959-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043959-protein ID=TCONS_00043959-protein|Name=TCONS_00043959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MNICNNYIPKRLFRLADVTRGLVTSARFAAANQQVEQVQEERNELEESDP
FLKNEIKKYNTGKRWLARMMGQDPDNFSQKDVDEAIAYLLPSSLFAKDAR
PVLKHPYELFPKTKESLFDSNNRPLSSAFYTGKPKFYDLTYQVWELKEKL
DTNTAITAEDSPAPSNEDKVMQWMKQYQLEQKLNEKLNEKISTGAKIKRE
TK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027621XLOC_027621Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043959TCONS_00043959Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..55

Blast
[Close]
BLAST of TCONS_00043959-protein vs. Swiss-Prot (Human)
Match: RT09 (28S ribosomal protein S9, mitochondrial OS=Homo sapiens GN=MRPS9 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.959e-32
Identity = 58/146 (39.73%), Postives = 92/146 (63.01%), Query Frame = 0 
Query:   48 SDPFLKNEIKKYNTGKRWLARMMGQDPDNFSQKDVDEAIAYLLPSSLFAKDARPVLKHPYELFPKTKESLFDSNNRPLSSAFYTGKPKFYDLTYQVWELKEKLDTNTAITAEDSPAPS---NEDKV-MQWMKQYQLEQKLNEKLNE 189
            ++ F+K +I+++N GKR LA MMG+DP+ F+Q+D+D AIAYL PS LF K ARPV+KHP ++FP+ +   +  + RP    FYTGK  +Y L + V+ +   L+ + +     S  P      D +  +W+ + +LE+ L EKL++
Sbjct:   70 TEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVIGSRWLIKEELEEMLVEKLSD 215
The following BLAST results are available for this feature:
BLAST of TCONS_00043959-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RT091.959e-3239.7328S ribosomal protein S9, mitochondrial OS=Homo sa... [more]
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