TCONS_00043833-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043833-protein
Unique NameTCONS_00043833-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043833-protein ID=TCONS_00043833-protein|Name=TCONS_00043833-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MNVFLISRNVVKLQKVQQEIFRLYGNKVKTICYPLDMTKLSDSSVYDALK
SKLDELDVGILVNNVGLFFKRMQFFLTVPRETHDGIINLNMSALTTMTFM
VLPGMISSGKGAIINIGSGACAHPTPTMSSYSASKKYVDYLTKTLQYEYA
EENITFQCIHPFYVSTNMTNNAKPSFFIPDPVTYANSALSTLGYSNTNYG
YWSHGLFGYLGEWLPDCVYNFLAVHINIHLWSWLTGVTVDKKKQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027505XLOC_027505Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043833TCONS_00043833Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 111..119
score: 54.33
coord: 131..150
score: 36.36
coord: 56..67
score: 39.37
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 152..169
score: 25.38
coord: 56..67
score: 38.37
coord: 131..150
score: 37.79
coord: 105..121
score: 33.17
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 2..172
e-value: 5.7E-32
score: 110.7
NoneNo IPR availableGENE3D3.40.50.720coord: 1..205
e-value: 4.4E-28
score: 97.9
NoneNo IPR availablePIRSFPIRSF00012611-beta-HSD1coord: 1..231
e-value: 3.8E-65
score: 217.7
NoneNo IPR availableCDDcd0535617beta-HSD1_like_SDR_ccoord: 1..215
e-value: 6.11879E-75
score: 229.027
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 118..146
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..230

Blast
[Close]
BLAST of TCONS_00043833-protein vs. Swiss-Prot (Human)
Match: HSDL1 (Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Homo sapiens GN=HSDL1 PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 1.349e-54
Identity = 97/222 (43.69%), Postives = 139/222 (62.61%), Query Frame = 0 
Query:    1 MNVFLISRNVVKLQKVQQEIFRLYGNKVKTICYPLDMTKLSDSSVYDALKSKLDELDVGILVNNVGLFFKRMQFFLTVPRETHDGIINLNMSALTTMTFMVLPGMISSGKGAIINIGSGACAHPTPTMSSYSASKKYVDYLTKTLQYEYAEENITFQCIHPFYVSTNMTNNA----KPSFFIPDPVTYANSALSTLGYSNTNYGYWSHG---LFG-YLGEWL 214
            +N+ LISRN  KLQ V ++I   Y  KV+T     D +  S   +Y  ++  L + DVGILVNNVG+F+   Q+F  +  +    IIN+N++A + M  +VLPGM+   KGAI+ I SG+C  PTP ++++SASK Y+D+ ++ LQYEYA + I  Q + PFYV+T+MT  +    + S+ +P P  YA+ A+STLG S    GYWSH    LF  Y+ EWL
Sbjct:   92 LNIILISRNEEKLQVVAKDIADTY--KVETDIIVADFS--SGREIYLPIREALKDKDVGILVNNVGVFYPYPQYFTQLSEDKLWDIINVNIAAASLMVHVVLPGMVERKKGAIVTISSGSCCKPTPQLAAFSASKAYLDHFSRALQYEYASKGIFVQSLIPFYVATSMTAPSNFLHRCSWLVPSPKVYAHHAVSTLGISKRTTGYWSHSIQFLFAQYMPEWL 309
The following BLAST results are available for this feature:
BLAST of TCONS_00043833-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HSDL11.349e-5443.69Inactive hydroxysteroid dehydrogenase-like protein... [more]
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