TCONS_00043817-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043817-protein
Unique NameTCONS_00043817-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043817-protein ID=TCONS_00043817-protein|Name=TCONS_00043817-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
LHDKVNIVPVIAKADTLTKKEVKELKQRILREIYENQIQIYQFPEADEEE
DDEEFIAVNKELKNSVPFAVVGSNTVYEVNGKKVRGRIYPWGVVDIENPA
HCDFTMLRNMLIRTHMQDLKDVTQDTHYENYRAKKLASGEPLEVSENGGG
GRASQELDSRDALLMEKEAEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027491XLOC_027491Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043817TCONS_00043817Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030379G_SEPTIN_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..136
e-value: 1.7E-6
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..161
IPR030379Septin-type guanine nucleotide-binding (G) domainPFAMPF00735Septincoord: 1..139
e-value: 3.8E-58
score: 196.8
IPR030379Septin-type guanine nucleotide-binding (G) domainPROSITEPS51719G_SEPTINcoord: 1..138
score: 56.385
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..111

Blast
[Close]
BLAST of TCONS_00043817-protein vs. Swiss-Prot (Human)
Match: SEPT7 (Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.054e-61
Identity = 87/138 (63.04%), Postives = 119/138 (86.23%), Query Frame = 0 
Query:    1 LHDKVNIVPVIAKADTLTKKEVKELKQRILREIYENQIQIYQFPEADEEEDDEEFIAVNKELKNSVPFAVVGSNTVYEVNGKKVRGRIYPWGVVDIENPAHCDFTMLRNMLIRTHMQDLKDVTQDTHYENYRAKKLAS 138
            LH+KVNI+P+IAKADTLT +E ++ K++I++EI E++I+IY+FPE D+EE+++    + K++K+ +P AVVGSNT+ EVNGK+VRGR YPWGV ++EN  HCDFT+LRNMLIRTHMQDLKDVT + HYENYR++KLA+
Sbjct:  183 LHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDEEENK----LVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAA 316
The following BLAST results are available for this feature:
BLAST of TCONS_00043817-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT73.054e-6163.04Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2[more]
back to top