TCONS_00043815-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043815-protein
Unique NameTCONS_00043815-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length125

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043815-protein ID=TCONS_00043815-protein|Name=TCONS_00043815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=125bp
MAPLSDEDKVIIRHYIEKEYTAYEIWKQNPEMNWHYSKVKRAVKKFKEYG
TMERKKGSGRPRSARTAENEAFVEEMICSQEEEPGTHASPRELARELEIS
HSSVRRIVEDKGYNQFKRLKTPQMN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027489XLOC_027489Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043815TCONS_00043815Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13565HTH_32coord: 39..107
e-value: 2.3E-9
score: 37.6
NoneNo IPR availableGENE3D1.10.10.60coord: 2..49
e-value: 7.5E-4
score: 18.7
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 50..110
e-value: 3.6E-6
score: 26.6
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 1..111

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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