TCONS_00043766-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043766-protein
Unique NameTCONS_00043766-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043766-protein ID=TCONS_00043766-protein|Name=TCONS_00043766-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
KPRATMYECDDCEKTFSTKSNYNRHVAKAHPEESEDEEDEDHPDSESMSN
DEDSDDSEQSQGDEETINIWETMFNECEETGLSINEIYKYKILFLRAMKK
NMTHKAIMQTLQRVRDEEDMDFEEALDFAIEKRRFLIHRQIIQFSNDEMK
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027442XLOC_027442Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043766TCONS_00043766Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 7..30
e-value: 9.6E-4
score: 28.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 9..30
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 7..35
score: 12.05
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 6..32
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 7..30
e-value: 1.7E-6
score: 28.0
NoneNo IPR availableGENE3D3.30.160.60coord: 1..20
e-value: 3.5E-6
score: 26.6
NoneNo IPR availableGENE3D3.30.160.60coord: 21..139
e-value: 1.6E-6
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..65

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043766-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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