TCONS_00043697-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043697-protein
Unique NameTCONS_00043697-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length896

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043697-protein ID=TCONS_00043697-protein|Name=TCONS_00043697-protein|organism=Clytia hemisphaerica|type=polypeptide|length=896bp
MRKLQWTSTYLVMSTILMLKQSAVAYRTRARLAYSTQTDNRYQVIGIFTL
CHYQATTSNHTRLELKRVRKTATIAEKIFTGHLLDKKEEPVYQYDVYDVC
GDHSKTIKLGIDLIENPRFNIIDYNRTSGLSKHKSKIIFVLTYIPIWDFF
VLANIVKLQDILVIDLRTDLTEGDYFYLAQDNDVIRGITLIEFIRKYFEV
LNYFWWKIKIDTYFKHQNRSELSFLLVQISFKTMTSSQRVVKGTKFSFLI
FVRSFVRSFVRSFVRSFVRSFVRSFVRSFVRSFVPKNFHFIFPGNSGYEE
HQITKRMIQFFDWRNITLVYLQQPSLFSEHDLYFPLNKRCYSVINIDTNS
TKYDPSAEKQTVINTKETTGSSLESQLESQTRNQTENTKHIVLNTPTLHI
LNQSDVVILIGTPAKQSEFFSQIEPNWVLQKQWVTFHHSQPPFIDIYTDL
SVISGTGDNTTEKSFQCRMAARKLLRIDRVGRNIARNKRKEVTNYKGFKI
KLNHKVKDHRMRFYDRKRDKFSQYASLEKFLVAKKVQSIVRPSQCYIPLK
CPAGRELLFKKYSSENKKATTFIQGWKCFLCAAGYYKSEENQTFCFPCPR
PLTSTTNRTGCYDPHEYVLVLFSIAASQKLSGIIFTAAGALFELVALFCF
IYYRDTPVARSSDVPLTIVHISINLVYYIGSAVLSNLYPTKGTCFLRLYF
VSEIYMFSNGITLIKAENLLHVFNKGARRIGRAEHKQRRIASAITMFILL
AISTVIILTVQWNSLPVVIDYKTQNKYEVPKHIVSCNIINAIHSILMYCA
LLQIVSLVQAFRSKALPATYKNSMSILYSSFVCMMATLAYVPIFLSVPDE
VSRDIAQYTLLMFHNFIGMVTLYGQKVFVMLFQKHLNNKDHVLRER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027381XLOC_027381Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043697TCONS_00043697Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 642..867
e-value: 8.1E-17
score: 61.7
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 628..896
score: 19.063
NoneNo IPR availableGENE3D2.10.50.10coord: 546..619
e-value: 0.0017
score: 18.1

Blast
[Close]
BLAST of TCONS_00043697-protein vs. Swiss-Prot (Human)
Match: GRM4 (Metabotropic glutamate receptor 4 OS=Homo sapiens GN=GRM4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.269e-17
Identity = 75/325 (23.08%), Postives = 139/325 (42.77%), Query Frame = 0 
Query:  576 WKCFLCAAGYYKSEENQTFCFPCPRPLTSTTNRTGCYDPHEYVLVLFSIAASQKLSGIIFTAAGALFELVALFCFIYYRDTPVARSSDVPLTIVHISINLVYYIGSAVLSNLYPTKGTCFLRLYFVSEIYMFSNGITLIKAENLLHVFNKGARRIGRAEHKQRRIASAITMFILLAISTVIILTVQ-W---NSLPVVIDYKTQNKYE--VPKHIVSCNIIN-AIHSILMYCALLQIVSLVQAFRSKALPATYKNSMSILYSSFVCMMATLAYVPIFLSVPDEVSRDIAQYTLL------MFHNFIGMVTLYGQKVFVMLFQKHLN 887
            W C  C    Y+ + ++  C  CP  +  T NRTGC       ++     +   +  +     G    L  +  F+ Y DTP+ ++S   L+ V ++   + Y  +  L    P  GTC LR  F+      S    L K   +  +F +G R +       R I+ A  + I  ++ ++ +L +  W   +    V+D++ Q   +    + ++ C+I + ++  +L Y  LL +   V A +++ +P T+  +  I ++ +   +  LA++PIF        +   Q T L           +GM  LY  KV+++LF    N
Sbjct:  540 WHCEPCTG--YQYQVDRYTCKTCPYDMRPTENRTGC---RPIPIIKLEWGSPWAVLPLFLAVVGIAATLFVVITFVRYNDTPIVKASGRELSYVLLAGIFLCY-ATTFLMIAEPDLGTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKRSV----SAPRFISPASQLAITFSLISLQLLGICVWFVVDPSHSVVDFQDQRTLDPRFARGVLKCDISDLSLICLLGYSMLLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSADKLYIQTTTLTVSVSLSASVSLGM--LYMPKVYIILFHPEQN 852
The following BLAST results are available for this feature:
BLAST of TCONS_00043697-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRM44.269e-1723.08Metabotropic glutamate receptor 4 OS=Homo sapiens ... [more]
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