TCONS_00043688-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043688-protein
Unique NameTCONS_00043688-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length401

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043688-protein ID=TCONS_00043688-protein|Name=TCONS_00043688-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
KVYHRVYVGQKVAVKSKSILKFLVYTPSSYIVEQIGKYSKENICPQVVCQ
PGNEYLYTKLADNTTDWDDTYRWTCQLCEQGFYKLHHGNTTCNKCPNDYL
SSEKRDSCYDPYISKTHSLKSPFVVFATILTSFGLCSCVFVFMEFFKYRA
TPMMKAADVSMTYAHLIIIALNFVLLFLSYYGAPNLLKCHFRMISFTVFY
TIIVGIILLRAQQVLKAFQSRVKMTKSEIRKSRATDVFLMLVIVVANNLI
LIVLLQTKPLMIRTLIQKRLFLKTSYCGTGSSQNVLIAFAICLHITCFVQ
AFRGRRLPGAFKETMPIVYGNFIAIVVFIILYPIVFFQKDILQKEAVYWL
AITLNMNVLIIFCYFRRIYFAIFRPEINTVEYSRAIVLAKMKKDSNLRVP
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027372XLOC_027372Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043688TCONS_00043688Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017978GPCR_3_C
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.50.10coord: 34..118
e-value: 3.0E-4
score: 20.6
IPR017978GPCR family 3, C-terminalPFAMPF000037tm_3coord: 137..366
e-value: 1.4E-20
score: 74.0
IPR017978GPCR family 3, C-terminalPROSITEPS50259G_PROTEIN_RECEP_F3_4coord: 123..387
score: 20.29

Blast
[Close]
BLAST of TCONS_00043688-protein vs. Swiss-Prot (Human)
Match: GRM7 (Metabotropic glutamate receptor 7 OS=Homo sapiens GN=GRM7 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.140e-24
Identity = 82/327 (25.08%), Postives = 143/327 (43.73%), Query Frame = 0 
Query:   73 WTCQLCEQGFYKLHHGNTTCNKCPNDYLSSEKRDSCYDPYISKTHSLKSPFVVFATILTSFGLCSCVFVFMEFFKYRATPMMKAADVSMTYAHLIIIALNFVLLFLSYYGAPNLLKCHFRMISFTVFYTIIVGIILLRAQQVLKAFQSRVKMTKSEIRKSRATDVFLMLVIVVANNLILIVLLQTKPLMI-------RTL--IQKRLFLKTSYCGTGSSQNVL-IAFAICLHITCFVQAFRGRRLPGAFKETMPIVYGNFIAIVVFIILYPIVFFQKDILQKEAVYWLAITLNMN----VLIIFCYFRRIYFAIFRPEINTVEYSRA 385
            WTC+ C+   Y+      TC  CP D   +E R  C D  I K     SP+ V    L   G+ + +FV   F +Y  TP+++A+   ++Y  L  I L +++ FL     P++  C FR +   +   I    +L +  ++ + F+   K   +    S  + + +   ++    L + +     P  I       +T+   Q R  LK   C     Q +  + ++I L +TC V A + R +P  F E  PI +  +   +V++   PI F      +K  +    +T++MN    V +   Y  ++Y  IF PE+N  +  R+
Sbjct:  543 WTCEPCDG--YQYQFDEMTCQHCPYDQRPNENRTGCQDIPIIKLE-WHSPWAVIPVFLAMLGIIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFL-MIAKPDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQGKKSVTAPRLISPTSQLAITSSLISVQLLGVFIWFGVDPPNIIIDYDEHKTMNPEQARGVLK---CDITDLQIICSLGYSILLMVTCTVYAIKTRGVPENFNEAKPIGFTMYTTCIVWLAFIPIFFGTAQSAEKLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELNVQKRKRS 862
The following BLAST results are available for this feature:
BLAST of TCONS_00043688-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRM72.140e-2425.08Metabotropic glutamate receptor 7 OS=Homo sapiens ... [more]
back to top