TCONS_00043667-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043667-protein
Unique NameTCONS_00043667-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length552

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043667-protein ID=TCONS_00043667-protein|Name=TCONS_00043667-protein|organism=Clytia hemisphaerica|type=polypeptide|length=552bp
MSQNKSFAVVCRRNKARGSSFDKQKFQRKPLNSLDETQPTTLNLLNEMES
LNLDEILFNVEEETVLEENTPKAVCDEDSRTAFVEDMSDARAFAVNQKCN
KFDSVILVEGVKVNFLVDTGASISILTLRTYKQLCEKLKIKPKLEKAKIH
VHTYGSEKDENNNLKVLGKTTLSIETPKKISCETFYVIDTKHKNLLSGSA
AISLEILLFNKPLYNLQESENVEFQSEHLINNPSFEQCINSAPESLRPLL
RNFENDVLSNKIGKLKGHQVKLHIDKQVKPVAQRERRIPFALREKARIEL
DKLEKAGIIEDVTNEPTPWLNPLVIAPKPNGKIRLCLDMRCANKAISRTN
YPTPTIDDLKCKLKGSAIFSKLDLRSAFHQLELDPECRYITAFQTDTRIK
RFKRLLFGVNSAPEELQHVLRALIADIDGVLNIWDDLLIHAKTETEHNEI
LLKVLTRFRDNGLTLNLGKCEFLKDSIEFFGHVFSKDGMKPNPVKVEAIL
NAKRPENQKALRSFLGLTNYLKSFINDYSTITFPLRQLLKKDTDWHWTPE
CD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027351XLOC_027351Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043667TCONS_00043667Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR000477RT_dom
IPR001969Aspartic_peptidase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 97..204
e-value: 1.1E-8
score: 34.8
IPR021109Aspartic peptidase domainSUPERFAMILY50630Acid proteasescoord: 105..138
NoneNo IPR availableGENE3D3.30.70.270coord: 485..552
e-value: 1.1E-24
score: 86.2
NoneNo IPR availableGENE3D3.30.70.270coord: 402..484
e-value: 4.8E-19
score: 67.9
NoneNo IPR availableGENE3D3.10.10.10coord: 268..401
e-value: 8.9E-28
score: 96.3
NoneNo IPR availableCDDcd01647RT_LTRcoord: 307..483
e-value: 6.49141E-55
score: 183.566
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 259..551
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 327..483
e-value: 1.8E-19
score: 70.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 307..484
score: 13.057
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 115..126

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043667-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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