TCONS_00043649-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043649-protein
Unique NameTCONS_00043649-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length254

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043649-protein ID=TCONS_00043649-protein|Name=TCONS_00043649-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
KKLIKLYVESQQWEEAFILVETHQNLKDEVYVPYANWLAENDRFDEAQEA
FHKAGKRADAVKVLEQLTLNAVVENRFNDAGYYFWQLSMQCLDLASQKMK
GDAKDVEENILDKFFEFQRKADIYYAYHPIAKYMSEPFTAEMPEALFNMG
RFLLHSSINETPHGVSRLHALLTVAKQGKTLGAYKLSRYAFDKLQTMRVP
QRFQQNIDVGSMTIRSKPFQDNQVIIKHRDGCTVFLRKERISSVLFIYPS
TYNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027333XLOC_027333Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043649TCONS_00043649Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1..96
e-value: 1.9E-5
score: 23.5

Blast
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BLAST of TCONS_00043649-protein vs. Swiss-Prot (Human)
Match: IF122 (Intraflagellar transport protein 122 homolog OS=Homo sapiens GN=IFT122 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 4.332e-85
Identity = 122/226 (53.98%), Postives = 174/226 (76.99%), Query Frame = 0 
Query:    1 KKLIKLYVESQQWEEAFILVETHQNLKDEVYVPYANWLAENDRFDEAQEAFHKAGKRADAVKVLEQLTLNAVVENRFNDAGYYFWQLSMQCLDLASQKMKGDAKDVEENILDKFFEFQRKADIYYAYHPIAKYMSEPFTAEMPEALFNMGRFLLHSSINETPHGVSRLHALLTVAKQGKTLGAYKLSRYAFDKLQTMRVPQRFQQNIDVGSMTIRSKPFQDNQVII 226
            K L++L+VE+Q+W+EAF L E H   KD++Y+PYA WLAENDRF+EAQ+AFHKAG++ +AV+VLEQLT NAV E+RFNDA YY+W LSMQCLD+A    + D       +L KF+ FQR A++Y+ YH I ++  +PF+   PE LFN+ RFLLHS   +TP G+S++  L T+AKQ K LGAY+L+R+A+DKL+ + +P RFQ++I++G++TIR+KPF D++ ++
Sbjct:  835 KSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKAGRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQCLDIAQDPAQKD------TMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELV 1054
The following BLAST results are available for this feature:
BLAST of TCONS_00043649-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF1224.332e-8553.98Intraflagellar transport protein 122 homolog OS=Ho... [more]
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