TCONS_00043494-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043494-protein
Unique NameTCONS_00043494-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length199

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043494-protein ID=TCONS_00043494-protein|Name=TCONS_00043494-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MNLSRFAATLQRRILSKHELESHFIICSQCRNLSRKTPAAFQLASSQEDF
IDCTKPARKVKVGVVFDIDGVLVRGRNVIPTAKEAIHRLEDNNVPYIYLT
NGGCETEEQKAEKLKERLGIEVDPDQVVLSHSPLRILDILHHKHVMVSGQ
GPVSEIAQMCGFSKVSHVNHIDGYFPELDVNDRRKQERMVSSYPKMRHF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027188XLOC_027188Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043494TCONS_00043494Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
IPR006357HAD-SF_hydro_IIA
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 52..188
e-value: 1.9E-20
score: 73.0
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 63..165
IPR006357HAD-superfamily hydrolase, subfamily IIAPFAMPF13344Hydrolase_6coord: 64..162
e-value: 5.2E-25
score: 87.4
NoneNo IPR availableCDDcd01427HAD_likecoord: 64..128
e-value: 2.94563E-10
score: 53.5279

Blast
[Close]
BLAST of TCONS_00043494-protein vs. Swiss-Prot (Human)
Match: HDHD5 (Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Homo sapiens GN=HDHD5 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.246e-29
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0 
Query:   63 GVVFDIDGVLVRGRNVIPTAKEAIHRLEDNN----VPYIYLTNGGCETEEQKAEKLKERLGIEVDPDQVVLSHSPLRILDILHHKHVMVSGQGPVSEIAQMCGFSKVSHVNHIDGYFPELDVNDRRKQERMVSSYPKMRH 198
            G + DIDGVLVRG  VIP A +A  RL ++     VP +++TN G   +  KA++L   LG EVD DQV+LSHSP+++    H K ++VSGQGPV E AQ  GF  V  V+ +   FP LD+ D    ER + + P  R+
Sbjct:   48 GFLLDIDGVLVRGHRVIPAALKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQELSALLGCEVDADQVILSHSPMKLFSEYHEKRMLVSGQGPVMENAQGLGFRNVVTVDELRMAFPLLDMVDL---ERRLKTTPLPRN 184
The following BLAST results are available for this feature:
BLAST of TCONS_00043494-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDHD52.246e-2945.00Haloacid dehalogenase-like hydrolase domain-contai... [more]
back to top