TCONS_00043205-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043205-protein
Unique NameTCONS_00043205-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length471

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043205-protein ID=TCONS_00043205-protein|Name=TCONS_00043205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
HHQHHQNHHKHQGQPIKSWTEYEFPSSTDRPSNHYKHWHHYSVSESSRPS
LIQNDSEHHSTYERNKNVPKNYYESMPADAGNNEFLELKFDQRHHPRGYP
DTSSTTKISQHKTYPRLFETTTSSRPQPLPVGTPLEEKKIWCLTCDGEVT
KKPCGHSSLVVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTY
CDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTP
GFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKTAVPVFS
SAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIYCDC
GRLFRQKAHLQAHLPACKRKREAVEAKYLSENESGGIPGRHVMLQQDSPA
SMSEEKDSPQSIHLGHDIINEESLPMEYEHQTHGQPSHDINENERAREGD
LAPMDIKNLPVGLPPLIRDPI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026924XLOC_026924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043205TCONS_00043205Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 319..341
e-value: 6.1E-4
score: 29.1
coord: 224..246
e-value: 5.3E-5
score: 32.6
coord: 196..218
e-value: 6.3E-4
score: 29.0
coord: 168..190
e-value: 0.002
score: 27.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 170..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 321..341
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 198..218
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 168..195
score: 15.583
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 319..346
score: 13.297
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 224..251
score: 12.923
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 196..223
score: 15.687
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 137..196
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 315..363
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 190..242
NoneNo IPR availableGENE3D3.30.160.60coord: 181..201
e-value: 1.5E-16
score: 60.0
NoneNo IPR availableGENE3D3.30.160.60coord: 352..361
e-value: 0.27
score: 11.0
NoneNo IPR availableGENE3D2.20.25.10coord: 217..229
e-value: 1.4E-4
score: 21.3
NoneNo IPR availableGENE3D2.20.28.30coord: 331..351
e-value: 5.2E-11
score: 42.2
NoneNo IPR availableGENE3D3.30.160.60coord: 275..330
e-value: 2.8E-9
score: 36.4
NoneNo IPR availableGENE3D3.30.160.60coord: 362..416
e-value: 0.1
score: 12.3
NoneNo IPR availableGENE3D3.30.160.60coord: 230..269
e-value: 1.2E-13
score: 50.3
NoneNo IPR availableGENE3D3.30.160.60coord: 1..180
e-value: 5.0E-11
score: 42.0
NoneNo IPR availableGENE3D3.30.160.60coord: 202..216
e-value: 1.6E-13
score: 49.9
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 198..218
e-value: 1.7E-5
score: 24.9
coord: 224..246
e-value: 2.3E-6
score: 27.6
coord: 319..341
e-value: 3.2E-6
score: 27.2
coord: 168..190
e-value: 3.2E-4
score: 20.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Blast
BLAST of TCONS_00043205-protein vs. Swiss-Prot (Human)
Match: ZN347 (Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.379e-28
Identity = 77/209 (36.84%), Postives = 104/209 (49.76%), Query Frame = 0
Query:  165 EKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIK--------TAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIY-C-DCGRLFRQKAHLQAH 363
            EK + C  C + F  RS L  H +IH+GEKP+ C  C K F R SHL RH L HTGEKP+KC  CGK F  +S+L  H+ +H                 E+P   +    V +  S        H+ +K         A  V+SS   + +I       E  + CN+CGKVFT+ SHL RH+  H   K Y C +CG++FR  ++L  H
Sbjct:  426 EKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPYKCNECGKAFRAHSNLTTHQVIHTG---------------EKPYKCNECGKVFTQNSHLANHQRIHTGVKPYMCNECGKAFSVYSSLTTHQVI----HTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRH 615          

HSP 2 Score: 112.464 bits (280), Expect = 2.331e-26
Identity = 78/217 (35.94%), Postives = 106/217 (48.85%), Query Frame = 0
Query:  160 VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSH---HSSIK--------TAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIY-C-DCGRLFRQKAHLQAH 363
            V+   EK + C  C +VF+  S L +H  IH+GEKP+ C  C K F + SHL RH   HTGEKP+KC  CGK F   S L  H+  H                 E+P   +    V +  S    +++H   H+  K         A  V SS A +++I       E  + C++CGKVF R SHL RH+L H   K Y C +CG+ FR  ++L  H
Sbjct:  309 VIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPYKCNECGKAFRARSSLAIHQATHSG---------------EKPYKCNECGKVFTQNS---HLTNHWRIHTGEKPYKCNECGKAFGVRSSLAIHLVI----HTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPYKCNECGKAFRAHSNLTTH 503          

HSP 3 Score: 107.071 bits (266), Expect = 1.401e-24
Identity = 80/227 (35.24%), Postives = 107/227 (47.14%), Query Frame = 0
Query:  160 VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVH---------ESTPGFVPSLPAIRPRQ----EEPAHAHPAPPVISPTSIQQMISSHHSSIK--------TAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIY-C-DCGRLFRQKAHLQAH 363
            V+   EK + C  C +VF   SHL RH  IH+GEKP+ C  C K F   S+L+RH   HTGEKP+K    GK F+++S+L  H+ +H         E    F  +    R R+     +P   +      S TS        H+  K         A  V SS   +  I   KK     + CN+CGKVFT+ SHL RH+  H   K Y C +CG+ F Q + L  H
Sbjct:  561 VIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPYKYNEYGKAFSEHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK----PYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKAFSQTSKLARH 783          

HSP 4 Score: 104.76 bits (260), Expect = 8.405e-24
Identity = 70/200 (35.00%), Postives = 94/200 (47.00%), Query Frame = 0
Query:  166 KEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKTAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIY-C-DCGRLFRQKAHLQAH 363
            K + C  C + F+  S L  H +IH+GEKP+ C  C K F + SHL RH   HTGEKP+KC  CGK F  NS L RH+++H                 E+P   +      S           HS++ T   + +               E  + CN+CGKVFT+ SHL RH+  H   K Y C +CG+ F Q + L  H
Sbjct:  539 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTG---------------EKPYKYNEYGKAFSE----------HSNLTTHQVIHT--------------GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARH 699          

HSP 5 Score: 96.6709 bits (239), Expect = 3.838e-21
Identity = 67/212 (31.60%), Postives = 94/212 (44.34%), Query Frame = 0
Query:  156 HSSL----VVQEREKEFPCPTCRRVFNNRSHLKRHNMIHSGEKPWACTYCDKRFNRKSHLNRHVLTHTGEKPFKCPYCGKGFADNSDLKRHKQVHESTPGFVPSLPAIRPRQEEPAHAHPAPPVISPTSIQQMISSHHSSIKTAVPVFSSAAGNVMIMGNKKKSEAKFPCNKCGKVFTRKSHLTRHKLTHEQIKIYCDCGRLFRQKAHLQAH 363
            HS+L    V+   EK + C  C +VF   SHL RH  +H+G KP+ C  C K F++ S L RH   HTGEKP++C  CGK F+  S L  H+ +H                 ++P   +    V +    Q    + H  I T                     E  + CN+CGK F++ S L RH+  H   K Y +CG+ F   + L  H
Sbjct:  637 HSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFSVRSSLTTHQAIHTG---------------KKPYKCNECGKVFT----QNSHLARHRGIHTG--------------------EKPYKCNECGKAFSQTSKLARHQRIHTGEKPY-ECGKPFSICSSLTTH 808          
The following BLAST results are available for this feature:
BLAST of TCONS_00043205-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN3471.379e-2836.84Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 ... [more]
back to top