TCONS_00043093-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043093-protein
Unique NameTCONS_00043093-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043093-protein ID=TCONS_00043093-protein|Name=TCONS_00043093-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
RGSVISNFSIVYHRVPFTEVLVLQEAIDKIGRIDTLNTTFINVTSNDVPN
EPPKFTAVSNTPYSIDINWNRVSNHSINGGGLYLYYIYYRSLKGDDRSWK
VYGTKNLTARLDHLIPGNLYGIRMMVSAPGANGIASLEQEIWTIEGVPYI
EPPNSTYDEIDHETTYLSWGEITQEYVPGTLVGYHIKVRKYHETQFVVHS
TVSKLMTITGLKADTFYWVEITGYTIAGDGPEAVVVFKTPRGPPGAPPPN
VTCQDMYSTSAINITWDAIPEDQENGYLVGYTIKYRLIRQSGKDLPKDDS
EVTVVFDRFVFAHEITDLVPYGIYQVDIYGYALEGDGPIATIFGETCACP
PFIYTNFLVQPPYVVMEGRGSNTTLSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026830XLOC_026830Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043093TCONS_00043093Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003961Fibronectin type IIISMARTSM00060FN3_2coord: 49..135
e-value: 0.0026
score: 27.0
coord: 149..230
e-value: 0.61
score: 19.1
coord: 244..337
e-value: 5.3E-4
score: 29.3
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 247..338
e-value: 2.4E-6
score: 27.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 247..351
score: 12.576
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 151..245
score: 10.762
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 49..146
score: 12.008
IPR003961Fibronectin type IIICDDcd00063FN3coord: 152..239
e-value: 7.67719E-4
score: 36.3203
IPR003961Fibronectin type IIICDDcd00063FN3coord: 250..341
e-value: 0.00165287
score: 35.1647
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 47..244
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 234..342
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 42..146
e-value: 1.4E-10
score: 40.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 147..239
e-value: 3.8E-10
score: 39.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 240..347
e-value: 2.1E-11
score: 43.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043093-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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