TCONS_00042928-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042928-protein
Unique NameTCONS_00042928-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042928-protein ID=TCONS_00042928-protein|Name=TCONS_00042928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=121bp
MLKIDFVKKIDNMIIIFFQIEFNVNMTCGNCENSIRDSLSKLQGITSVTI
NIQQQQVIVTTTYPSEVVQKAIESTGMLAIVKGQGLDISNHMGAAISILK
RNQRTLGLVRFTQVIIPTSYF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026695XLOC_026695Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042928TCONS_00042928Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 22..76
e-value: 1.1E-14
score: 54.5
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 25..81
score: 13.231
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 21..76
e-value: 4.21304E-14
score: 61.4677
IPR006121Heavy metal-associated domain, HMASUPERFAMILY55008HMA, heavy metal-associated domaincoord: 22..79
NoneNo IPR availableGENE3D3.30.70.100coord: 18..79
e-value: 5.8E-16
score: 58.4

Blast
[Close]
BLAST of TCONS_00042928-protein vs. Swiss-Prot (Human)
Match: CCS (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.688e-17
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:   20 IEFNVNMTCGNCENSIRDSLSKLQGITSVTINIQQQQVIVTTTYPSEVVQKAIESTGMLAIVKGQGLDISNHMGAAISILKRNQRTLGLVRFTQV 114
            +EF V MTC +C +++R SL  + G+  V ++++ Q V+V TT PS+ VQ  +E TG  A++KG G     ++GAA++IL       G+VRF Q+
Sbjct:   14 LEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVAILGGPGTVQGVVRFLQL 108
The following BLAST results are available for this feature:
BLAST of TCONS_00042928-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCS1.688e-1740.00Copper chaperone for superoxide dismutase OS=Homo ... [more]
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