TCONS_00042224-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042224-protein
Unique NameTCONS_00042224-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042224-protein ID=TCONS_00042224-protein|Name=TCONS_00042224-protein|organism=Clytia hemisphaerica|type=polypeptide|length=178bp
IINNSIDKHLFPDKWKIARVSPVPKIDHPTKLKDYRPISILPVLSKVYER
VILTQLCDFIERNSLYRPNHSEFRKGHTTTTLLLKLRDDIIKAMNKSEIT
LSILIDYSKAFDTIDHFTLIDKLKKLNFSSMSLQIIISYLTNRHQFVQVN
DKKSPVQPIHFGVPQGSILGPVLFNLYV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026086XLOC_026086Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042224TCONS_00042224Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 24..178
e-value: 2.9E-28
score: 98.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 4..178
score: 17.055
NoneNo IPR availableGENE3D3.30.70.270coord: 44..178
e-value: 6.0E-14
score: 51.6
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 11..177

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042224-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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