TCONS_00042176-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042176-protein
Unique NameTCONS_00042176-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042176-protein ID=TCONS_00042176-protein|Name=TCONS_00042176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIK
SFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNR
IHTGEKPFKC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026045XLOC_026045Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042176TCONS_00042176Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 52..74
e-value: 8.0E-5
score: 32.0
coord: 1..18
e-value: 62.0
score: 6.3
coord: 24..46
e-value: 3.5E-4
score: 29.9
coord: 80..102
e-value: 0.028
score: 23.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 82..102
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 26..46
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 54..74
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 52..79
score: 14.752
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 24..51
score: 14.357
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 80..107
score: 16.228
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..23
score: 14.046
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 5..61
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 50..102
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 24..46
e-value: 4.3E-8
score: 33.1
coord: 1..18
e-value: 0.0015
score: 18.8
coord: 81..102
e-value: 1.9E-4
score: 21.6
coord: 52..74
e-value: 1.2E-7
score: 31.6
NoneNo IPR availableGENE3D3.30.160.60coord: 89..101
e-value: 1.1E-11
score: 44.2
NoneNo IPR availableGENE3D3.30.160.60coord: 102..110
e-value: 3.5E-4
score: 20.0
NoneNo IPR availableGENE3D3.30.160.60coord: 35..62
e-value: 8.6E-22
score: 76.5
NoneNo IPR availableGENE3D2.160.10.10coord: 15..34
e-value: 4.2E-20
score: 71.8
NoneNo IPR availableGENE3D2.20.28.30coord: 63..88
e-value: 2.7E-18
score: 65.5
NoneNo IPR availableGENE3D3.30.160.60coord: 1..14
e-value: 1.7E-6
score: 27.7

Blast
BLAST of TCONS_00042176-protein vs. Swiss-Prot (Human)
Match: ZN501 (Zinc finger protein 501 OS=Homo sapiens GN=ZNF501 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.920e-38
Identity = 62/110 (56.36%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            CGK FTQ++SL  H +IH GE+P+ C +CG CF +QSNL  H++IH+  K +KC EC K+F++K +L  HLR HTGE   +C ECGK F     LIKH RIHTGEKP+KC
Sbjct:   27 CGKFFTQRSSLTQHQRIHRGEKPYVCSECGSCFRKQSNLTQHLRIHTGEKPYKCNECEKAFQTKAILVQHLRIHTGEKPYKCNECGKAFCQSPSLIKHQRIHTGEKPYKC 136          

HSP 2 Score: 110.153 bits (274), Expect = 5.030e-31
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            CG CF +Q++L  HL+IHTGE+P+KC +C K F  ++ L  H++IH+  K +KC ECGK+F     L  H R HTGE   +C ECGK F     L +H R H+G+KPFKC
Sbjct:   55 CGSCFRKQSNLTQHLRIHTGEKPYKCNECEKAFQTKAILVQHLRIHTGEKPYKCNECGKAFCQSPSLIKHQRIHTGEKPYKCTECGKAFSQSICLTRHQRSHSGDKPFKC 164          

HSP 3 Score: 108.612 bits (270), Expect = 2.018e-30
Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            CGK F+Q   L  H + H+G++PFKC +CGK F + + L  H +IHS  K + C ECGK+F     L  H R HTGE L +C EC K F+ + +L +H RIHTGEKP++C
Sbjct:  139 CGKAFSQSICLTRHQRSHSGDKPFKCNECGKAFNQSACLMQHQRIHSGEKPYTCTECGKAFTQNSSLVEHERTHTGEKLYKCSECEKTFRKQAHLSEHYRIHTGEKPYEC 248          

HSP 4 Score: 107.842 bits (268), Expect = 3.913e-30
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            CGK F Q  SL  H +IHTGE+P+KC +CGK F++   L  H + HS  K FKC ECGK+F     L  H R H+GE    C ECGK F   + L++H R HTGEK +KC
Sbjct:  111 CGKAFCQSPSLIKHQRIHTGEKPYKCTECGKAFSQSICLTRHQRSHSGDKPFKCNECGKAFNQSACLMQHQRIHSGEKPYTCTECGKAFTQNSSLVEHERTHTGEKLYKC 220          

HSP 5 Score: 106.686 bits (265), Expect = 1.379e-29
Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            C K F  +  L  HL+IHTGE+P+KC +CGK F +  +L  H +IH+  K +KC ECGK+F     L  H R H+G+   +C ECGK F     L++H RIH+GEKP+ C
Sbjct:   83 CEKAFQTKAILVQHLRIHTGEKPYKCNECGKAFCQSPSLIKHQRIHTGEKPYKCTECGKAFSQSICLTRHQRSHSGDKPFKCNECGKAFNQSACLMQHQRIHSGEKPYTC 192          

HSP 6 Score: 98.5969 bits (244), Expect = 1.409e-26
Identity = 48/105 (45.71%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    1 CGKCFTQQNSLNAHLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGE 105
            CGK F Q   L  H +IH+GE+P+ C +CGK FT+ S+L  H + H+  K +KC EC K+FR +  L  H R HTGE    C  CGK F+  + L++H R+H GE
Sbjct:  167 CGKAFNQSACLMQHQRIHSGEKPYTCTECGKAFTQNSSLVEHERTHTGEKLYKCSECEKTFRKQAHLSEHYRIHTGEKPYECVGCGKSFRHSSALLRHQRLHAGE 271          

HSP 7 Score: 97.4413 bits (241), Expect = 4.722e-26
Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 0
Query:   14 HLKIHTGERPFKCQDCGKCFTRQSNLNVHVKIHSDIKSFKCEECGKSFRSKYLLKNHLREHTGEPLSRCQECGKYFKTKNYLIKHNRIHTGEKPFKC 110
            H +++  ++P KC +CGK FT++S+L  H +IH   K + C ECG  FR +  L  HLR HTGE   +C EC K F+TK  L++H RIHTGEKP+KC
Sbjct:   12 HGRVNMQKKPSKCSECGKFFTQRSSLTQHQRIHRGEKPYVCSECGSCFRKQSNLTQHLRIHTGEKPYKCNECEKAFQTKAILVQHLRIHTGEKPYKC 108          
The following BLAST results are available for this feature:
BLAST of TCONS_00042176-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN5011.920e-3856.36Zinc finger protein 501 OS=Homo sapiens GN=ZNF501 ... [more]
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