TCONS_00041929-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041929-protein
Unique NameTCONS_00041929-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length642

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041929-protein ID=TCONS_00041929-protein|Name=TCONS_00041929-protein|organism=Clytia hemisphaerica|type=polypeptide|length=642bp
KKMLLKASFLTVGILFLSGIKAGQDGVYNHVTCAHDHVKMGCFNNQRHIF
KDVLATTLQDYPEGYIGQKADWNNFSKHLQTLVCKCKDIAVKKGYKYFAI
GNYEICYGAKDAAAFEDFLKKSKGHVSKQCLMGQWYEECKTSDTDLCAGE
VESMYIYEMRRAMPTQPTPVNGGYSQWTDWSSCDATCGEGQQVRERTCTN
PPPSRGGKDCEQLGASSEIKKCNLKPCGAVVSKNKLFKKIEKIHKSYSFT
FEIMPTGTISGWSNIVHAYDKSGNCCGYGQRIPALFMFSKSTRLHITNSV
NGNGNHVVNEHIPMGKFTNVTVQQVERSDGSYLYSVYFNERRIASTVNTK
PQEFNNVQLYASDKWYNPSKVILRYFDFQSPLPKQFFKPQQGYVRQSIPV
IDKSYEVSFKVKPNKQYYGNYKGILSISNTKVKDGVSGFRIPGVFIKDKA
VLHIFNDVNGDPNRAVSKSIPYNEMTYVKVKQVLTEFGLYKYTVSLDDHV
IYETFNTKPKRFEGNVLLTCDKIHQGADVLIEDFHLATPVVEHDVYEIAR
NQYIKTIPIIQKSYRFTMEIKPLVVRHGWTNIFHATSNAGNCCGYGSRIP
AFFLFSGSTRLHMCNAVNGRGNFYIDRTIPMNKFTKVDLQQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025823XLOC_025823Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041929TCONS_00041929Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 174..228
e-value: 4.9E-15
score: 66.0
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 170..227
e-value: 1.4E-16
score: 60.0
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 175..227
e-value: 1.7E-11
score: 44.0
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 171..228
score: 13.116
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 168..227
NoneNo IPR availableGENE3D2.60.120.200coord: 235..376
e-value: 0.02
score: 14.4

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041929-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top