TCONS_00041918-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041918-protein
Unique NameTCONS_00041918-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length435

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041918-protein ID=TCONS_00041918-protein|Name=TCONS_00041918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=435bp
RFCSQEFTLDKFDPQVHLSNNSIQKHYRNGIRSDKLPDSNMWSSDEFKTY
LQTIGKDTSWDSKIYPGMKSAIIGALQCCQTSLEYRRNSFELYGADFMLS
ENLDPWLIEINSSPALGASTPVTKELCRNVIEDTLKVVLDRRENKQADVG
RFELAFRQPYIAPPSYMGCNVYIEGKQISKPKVTKAPESKIELKKSDDNC
DDAGQEEESMVAVRTDIKKVKSKETCENAKTKTTKSAPKFVYEKKEPQRI
DKTRLDGIIEKLSRRSKSKETKEKIEIIEKAKSSFVAPRIEKQSMKQIEK
SVSAPKLIDRDPREKLSVNSHRITTYKDELKINVTKPHSEKRKMKWDKME
FLRKNAPVVTEWVNVDFSKADVLGPTISSCPTTKHTQTYSIPSNNINNNT
MTISIAEVMENQTIKPSLSTNCGKINRRKSVGRKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025813XLOC_025813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041918TCONS_00041918Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 15..300
e-value: 1.1E-13
score: 50.8
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 61..139
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 1..142
e-value: 2.7E-36
score: 125.1
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePROSITEPS51221TTLcoord: 1..150
score: 15.499

Blast
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BLAST of TCONS_00041918-protein vs. Swiss-Prot (Human)
Match: TTLL3 (Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTLL3 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 5.897e-54
Identity = 90/182 (49.45%), Postives = 116/182 (63.74%), Query Frame = 0 
Query:    1 RFCSQEFTLDKFDPQVHLSNNSIQKHYRNGI-RSDKLPDSNMWSSDEFKTYLQTIGKDTSWDSKIYPGMKSAIIGALQCCQTSLEYRRNSFELYGADFMLSENLDPWLIEINSSPALGASTPVTKELCRNVIEDTLKVVLDRRENKQADVGRFELAFRQPYIAPPSYMGCNVYIEGKQISKP 181
            RF +Q F+L   D  VHL NNSIQKH  N   R   LP  NMWSS  F+ +LQ +G   +W + I PGMK A+I ALQ  Q +++ R+ SFELYGADF+  E+  PWLIEIN+SP +  ST VT  LC  V  DTL+VV+DR  ++  D G FEL ++QP +  P Y+G  + +EG  I KP
Sbjct:  360 RFSTQPFSLKNLDNSVHLCNNSIQKHLENSCHRHPLLPPDNMWSSQRFQAHLQEMGAPNAWSTIIVPGMKDAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRMLDRNCDTGAFELIYKQPAVEVPQYVGIRLLVEGFTIKKP 541
The following BLAST results are available for this feature:
BLAST of TCONS_00041918-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTLL35.897e-5449.45Tubulin monoglycylase TTLL3 OS=Homo sapiens GN=TTL... [more]
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