TCONS_00041857-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041857-protein
Unique NameTCONS_00041857-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041857-protein ID=TCONS_00041857-protein|Name=TCONS_00041857-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
STFHSEQAIAYGTNMVGGVNPKKAGSEHIGLPVFASVREAREATNCDATV
IYVPPPGAAAAIIEAVEAEVPLITCITEGIPQQDMVKVKHVLERQSKSRL
IGPNCPGIIKPGECKIGIMPGHIHRPGSVGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025757XLOC_025757Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041857TCONS_00041857Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003781CoA-bd
IPR016102Succinyl-CoA_synth-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0048037cofactor binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0048037 cofactor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003781CoA-bindingSMARTSM00881CoA_binding_2coord: 1..80
e-value: 6.2E-11
score: 52.3
IPR003781CoA-bindingPFAMPF02629CoA_bindingcoord: 3..79
e-value: 2.4E-23
score: 82.5
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 100..130
e-value: 1.2E-7
score: 30.7
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 104..130
NoneNo IPR availableGENE3D3.40.50.720coord: 1..99
e-value: 3.8E-36
score: 123.8
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..103

Blast
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BLAST of TCONS_00041857-protein vs. Swiss-Prot (Human)
Match: SUCA (Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Homo sapiens GN=SUCLG1 PE=1 SV=4)

HSP 1 Score: 178.718 bits (452), Expect = 1.705e-56
Identity = 91/129 (70.54%), Postives = 107/129 (82.95%), Query Frame = 0 
Query:    2 TFHSEQAIAYGTNMVGGVNPKKAGSEHIGLPVFASVREAREATNCDATVIYVPPPGAAAAIIEAVEAEVPLITCITEGIPQQDMVKVKHVLERQSKSRLIGPNCPGIIKPGECKIGIMPGHIHRPGSVG 130
            TFHS+QA+ YGT +VGG  P K G  H+GLPVF +V+EA+E T   A+VIYVPPP AAAAI EA+EAE+PL+ CITEGIPQQDMV+VKH L RQ K+RLIGPNCPG+I PGECKIGIMPGHIH+ G +G
Sbjct:   69 TFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIG 197
The following BLAST results are available for this feature:
BLAST of TCONS_00041857-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUCA1.705e-5670.54Succinate--CoA ligase [ADP/GDP-forming] subunit al... [more]
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