TCONS_00041503-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041503-protein
Unique NameTCONS_00041503-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041503-protein ID=TCONS_00041503-protein|Name=TCONS_00041503-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1791bp
LADTPCAWGNDTCDKDISTCIDTYTHPNYFDCNCSAGYVKQNHTTCFDFC
VDNSDTCNDTSTTCLATPGKGRHYECPCKHGFERLDNNTDSCTPMPRPCD
TGKDTCNKTRSNCTNTLTAPVYFNCSCGDGYLKFNNSVDDCQDYCHIEAD
SCNKTSTMCEATPGKGRHYECPCKFGFERLDNNTDSCTPMPRPCDTGKDT
CNKTSSNCTNSFEAPFYYNCTCEDGYLKFNNSLDQCHEYCRIEADTCNTT
STTCMSTPGKGRHYECPCKLGFERLDNNMDKCTPMPRPCDTGKDTCNKTR
SNCTNTLTAPVYYNCSCGDGYLKFNNSVDDCQDYCHIEADSCNKTSTMCE
ATPRKGRHYECPCKFGFERLDYNTDSCTPMPRPCDTGKDTCNKTSSNCTN
SFEAPFYYNCTCEAGYLKFNSSLDQCHEYCRIEADTCNTTSTTCMSTPGK
GRHYECPCKHGFERLDNNMDKCTPMPRPCDTGKDTCNKTRSNCTNTLTAP
VYFNCSCGDGYLKFNNSVDDCQDYCHIEADSCNKTSTMCEATPGKGRHYE
CPCKFGFERLDNNTDSCTPMPRPCDTGKDTCNKTSSNCTNSFEAPFYYNC
TCEAGYLKFNSSLDQCHEYCRIEADTCNTTSTTCMSTPGKGRHYECPCKH
GFERLDNNMDKCTPMPRPCDTGKDTCNKTRSNCTNTLTAPVYFNCSCGDG
YLKFNNSVDDCQDYCHIEADSCNKTSTMCEATPGKGRHYECPCKFGFERL
DNNTDSCTPMPRPCDTGKDTCNKTSSNCTNSFEAPFYYNCTCEAGYLKFN
SSLDQCHEYCRIEADTCNTTSTTCMSTPGKGRHYECPCKHGFERLDNNMD
KCTPMPRPCDTGKDTCNKTRSNCTNTLTAPVYFNCSCGDGYLKFNNSVDD
CQDYCHIEADSCNKTSTMCEATPGKGRHYECPCKFGFERLDNNTDSCTPM
PRPCDTGKDTCNKTSSNCTNSFEAPFYYNCTCEAGYLKFNSSLDQCHEYC
RIEADTCNTTSTTCMSTPGKGRHYECPCKHGFERLDNNMDKCTPMPRPCD
TGKDTCNKTRSNCTNTLTAPVYFNCSCGDGYLKFNNSVDDCQDYCHIEAD
SCNKTSTMCEATPGKGRHYECPCKFGFERLDNNTDSCTPMPRPCDTGKDT
CNKTSSNCTNSFEAPFYYNCTCEAGYLKFNSSLDQCHEYCRIEADTCNTT
STTCMSTPGKGRHYECPCKHGFERLDNNMDKCTPMPRPCDTGKDTCNKTS
SNCTNTFEAPFYYNCTCEDGYLKFNNSLDQCHEYCRIEADTCNDVSTTCL
STPGKGRHYECPCKDGFERLGNDTDSCTPIPRPCDTGDDTCNKTTSSCNN
TLTNPYHNCTCKPGYLKEGNSINKCLDFCASGDHNCNLQSTVCRPTPGQG
SHFQCVCRDGYEVIPGNKTTCKKIVVSSSMILPSTSVISQLATPTTSFVE
QPGPQTTVVQLTETKTTPIVATTEVVQPPATGTVVVQPSVSQTEVVQPSE
TKTTPIVATTEVVQPPATGTVVVQPSVSQTEVVQPSETKTTPIVATTEVI
QPPVTQTEVVQPTETKTTPIVATTEVVQPPVTQTEVVQPSVSQTEVVQPT
ETKTTPIVATTEVVQPPVTQTEVVQPTETKTTPIVATTEVVQPPVTQTDV
VQPTETKTTPIVATTEVVQPPVTQTEVVQPSVSQTEVVQATETKTTPIVA
TTKVVQPPVTQTEVVQPTETKTTPIVATTEVVQPPVTQTEVVQPTETKTT
PIVATTEVVQSPVTQTEVVQPTETKTTPIVATTEVVQPPVX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025457XLOC_025457Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041503TCONS_00041503Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 1238..1282
e-value: 180.0
score: 1.7
coord: 999..1043
e-value: 36.0
score: 9.6
coord: 1143..1187
e-value: 180.0
score: 1.7
coord: 714..758
e-value: 85.0
score: 5.3
coord: 5..47
e-value: 42.0
score: 8.9
coord: 49..93
e-value: 18.0
score: 13.2
coord: 429..473
e-value: 36.0
score: 9.6
coord: 668..712
e-value: 180.0
score: 1.7
coord: 144..188
e-value: 85.0
score: 5.3
coord: 383..427
e-value: 180.0
score: 1.7
coord: 1189..1233
e-value: 36.0
score: 9.6
coord: 904..948
e-value: 85.0
score: 5.3
coord: 573..617
e-value: 180.0
score: 1.7
coord: 478..522
e-value: 180.0
score: 1.7
coord: 619..663
e-value: 36.0
score: 9.6
coord: 1378..1422
e-value: 16.0
score: 13.6
coord: 1284..1328
e-value: 53.0
score: 7.7
coord: 858..902
e-value: 180.0
score: 1.7
coord: 193..237
e-value: 180.0
score: 1.7
coord: 288..332
e-value: 150.0
score: 2.4
coord: 763..807
e-value: 180.0
score: 1.7
coord: 1094..1138
e-value: 85.0
score: 5.3
coord: 1048..1092
e-value: 180.0
score: 1.7
coord: 334..378
e-value: 94.0
score: 4.9
coord: 809..853
e-value: 36.0
score: 9.6
coord: 953..997
e-value: 180.0
score: 1.7
coord: 239..283
e-value: 40.0
score: 9.1
coord: 524..568
e-value: 85.0
score: 5.3
coord: 98..142
e-value: 180.0
score: 1.7
NoneNo IPR availableGENE3D2.10.25.10coord: 1188..1235
e-value: 0.014
score: 15.3
NoneNo IPR availableGENE3D2.10.25.10coord: 49..96
e-value: 0.002
score: 17.9
NoneNo IPR availableGENE3D2.10.25.10coord: 294..333
e-value: 0.5
score: 10.0
coord: 5..48
e-value: 0.072
score: 12.7
NoneNo IPR availableGENE3D2.10.25.10coord: 334..394
e-value: 0.3
score: 10.9
coord: 1092..1153
e-value: 0.064
score: 13.0
coord: 1376..1428
e-value: 9.7E-5
score: 22.1
coord: 522..584
e-value: 0.044
score: 13.6
coord: 712..774
e-value: 0.04
score: 13.7
coord: 142..204
e-value: 0.037
score: 13.8
NoneNo IPR availableGENE3D2.10.25.10coord: 999..1060
e-value: 0.0097
score: 15.5
coord: 904..964
e-value: 0.071
score: 12.8
coord: 239..293
e-value: 0.011
score: 15.3
coord: 429..490
e-value: 0.0097
score: 15.5
coord: 619..680
e-value: 0.0097
score: 15.5
coord: 1284..1345
e-value: 0.0014
score: 18.3
coord: 809..870
e-value: 0.0097
score: 15.5

Blast
[Close]
BLAST of TCONS_00041503-protein vs. Swiss-Prot (Human)
Match: QRIC2 (Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.476e-21
Identity = 88/303 (29.04%), Postives = 124/303 (40.92%), Query Frame = 0 
Query: 1468 PIVATTEVVQPPATGTVVVQPSVSQTEVVQPSETKTTPIVATTEVVQPPATGTVVVQPSVSQTEVVQPSETK-------------TTPIVATTEVIQPPVTQTEVVQPTETKTTPIVA----TTEVVQPPVTQTEVVQPSVSQTEVVQPTETKTTPIVATTEVVQPPVTQTEVVQPTETK---TTPIVATTEVVQPPVTQTDVVQPTETK---TTPIVATTEVVQPPVTQTEVVQPSVSQTEVVQATETKTTPIVATTKVVQPPVTQTEVVQPTETK---TTPIVATTEVVQPPVTQTEVVQP 1744
            P     ++VQ      V+VQP V Q  +VQP   +         +VQP A    +VQP   Q +VVQP   +               P      ++QP V Q  + QP       +V        +VQP   Q  +VQP V Q  + QP E + +       +VQP + Q  +VQP   +     P      +VQP V Q  +VQP   +     P      +VQP   Q  +VQP V Q  +VQ       P V    +VQP + Q  ++QP   +     P      +VQP + Q  +VQP
Sbjct:  477 PGTGQHDLVQSGTGQGVLVQPGVDQPGMVQPGRFQRA-------LVQPGAYQPGLVQPGADQIDVVQPGADQHGLVQSGADQSDLAQPGAVQHGLVQPGVDQRGLAQPRADHQRGLVPPGADQRGLVQPGADQHGLVQPGVDQHGLAQPGEVQRS-------LVQPGIVQRGLVQPGAVQRGLVQPGAVQRGLVQPGVDQRGLVQPGAVQRGLVQPGAVQHGLVQPGADQRGLVQPGVDQRGLVQ-------PGVDQRGLVQPGMDQRGLIQPGADQPGLVQPGAGQLGMVQPGIGQQGMVQP 758

HSP 2 Score: 91.6633 bits (226), Expect = 2.716e-18
Identity = 93/340 (27.35%), Postives = 140/340 (41.18%), Query Frame = 0 
Query: 1461 LTETKTTPIVATTE-VVQPPATGTVVVQPSVSQTEVVQPSETKTTPIVATT---EVVQPPATGTVVVQPSVSQTEVVQPSETK---TTPIVATTEVIQPPVTQTEVVQPTETKTTPIVATTE---VVQPPVTQTEVVQPSVSQTEVVQPTETK---TTPIVATTEVVQPPVTQTEVVQPTETKT---TPIVATTEVVQPPVTQTDVVQPTETKTTPIVA----TTEVVQPPVTQTEVVQPSVSQTEVVQATETKTT---PIVATTKVVQPPVTQTEVVQPTETK---TTPIVATTEVVQPPVTQTEVVQPTETK---TTPIVATTEVVQSPVTQTEVVQP 1771
            L      PI A  +  VQP    T  +QP   Q +++Q    +   +        +VQP A    +V+P + Q+ + QP   +     P +  + + QP   Q  ++QP   +   + + T    +VQP V Q  +VQP   Q  +VQP   +     P     +VVQP   Q  +VQ    ++    P      +VQP V Q  + QP       +V        +VQP   Q  +VQP V Q  + Q  E + +   P +    +VQP   Q  +VQP   +     P V    +VQP   Q  +VQP   +     P      +VQ  V Q  +VQP
Sbjct:  369 LVSPGLMPISADQQGFVQPSLEATGFIQPGTEQHDLIQSGRFQRALVQRGAYQPGLVQPGADQRGLVRPGMDQSGLAQPGADQRGLVWPGMDQSGLAQPGRDQHGLIQPGTGQHDLVQSGTGQGVLVQPGVDQPGMVQPGRFQRALVQPGAYQPGLVQPGADQIDVVQPGADQHGLVQSGADQSDLAQPGAVQHGLVQPGVDQRGLAQPRADHQRGLVPPGADQRGLVQPGADQHGLVQPGVDQHGLAQPGEVQRSLVQPGIVQRGLVQPGAVQRGLVQPGAVQRGLVQPGVDQRGLVQPGAVQRGLVQPGAVQHGLVQPGADQRGLVQPGVDQRGLVQP 708
The following BLAST results are available for this feature:
BLAST of TCONS_00041503-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QRIC22.476e-2129.04Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2... [more]
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