TCONS_00041468-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041468-protein
Unique NameTCONS_00041468-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041468-protein ID=TCONS_00041468-protein|Name=TCONS_00041468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MIGSNLSNKNNTLNINKKVKMWRQARSVNQKLFPQFESLKQGRLSKVFDM
YRDYTQALKDTVGVIKEKPIKCTVYGTLLTLSVYCNHRNPDMGSYRQSLL
DASNEHTLLSDSIRNKKSADEVKKLMKYVAEDRLQLIHFGVFSVILLNDH
SKYHDAYDKHCSTIQSRWIYIDEWKERIKDVGFLDKWYFLERNMIDFDVN
EDEFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025434XLOC_025434Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041468TCONS_00041468Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019322TIMM29
Vocabulary: Cellular Component
TermDefinition
GO:0042721mitochondrial inner membrane protein insertion complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0042721 mitochondrial inner membrane protein insertion complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019322Mitochondrial import inner membrane translocase subunit Tim29PFAMPF10171Tim29coord: 47..201
e-value: 1.1E-43
score: 148.5

Blast
[Close]
BLAST of TCONS_00041468-protein vs. Swiss-Prot (Human)
Match: TIM29 (Mitochondrial import inner membrane translocase subunit Tim29 OS=Homo sapiens GN=TIMM29 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.755e-24
Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 0 
Query:   50 MYRDYTQALKDTVGVIKEKPIKCTVYGTLLTLSVYCNHRNPDMGSYRQSLLDASNEHTLLSDSIRNKKSADEVKKLMKYVAEDRLQLIHFGVFSVILLNDHSKYHDAYDKHCSTIQSRWIYIDEWKERIKDVGFLDKWYFLERNMIDFDVNEDEF 204
            + RDY +A +D     + +P +  VY  LL  +  C    P  G++ ++LL+AS    LL+ + RN++S   V++L+      RL+ ++ G+ S++           Y   C  +Q RW    ++  R+ DVGF+ +W+ L   M D D+N+DEF
Sbjct:   38 LLRDYAEACRDASAEARARPGRAAVYVGLLGGAAACFTLAPSEGAFEEALLEASGTLLLLAPATRNRESEAFVQRLLWLRGRGRLRYVNLGLCSLVYEAPFDAQASLYQARCRYLQPRWT---DFPGRVLDVGFVGRWWVLGAWMRDCDINDDEF 189
The following BLAST results are available for this feature:
BLAST of TCONS_00041468-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIM291.755e-2430.32Mitochondrial import inner membrane translocase su... [more]
back to top