TCONS_00041344-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041344-protein
Unique NameTCONS_00041344-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length502

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041344-protein ID=TCONS_00041344-protein|Name=TCONS_00041344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=502bp
MRLFWTEQQKYLRTDKNHQLRYHPDIIKFCLSISAKSSAAYDQLRLNSKD
GSGILVLPSQRTLRNYRNHIKPQQGFDPKIVADLTERTKKFSEREKFISV
VIDEMKVQEDLVWDRSTGKLIGFLDLGDTAINESTISNETKLATHVMVFL
VKSVMNPLSFSFATFATDTASSAQIYSLFWKCVSILEISCQLKVIATVAD
GASTNRRFAKMNRDQDDVKCSEVVYRTINVYAPERYIYFFADAPHLIKTS
RNCLWKSGQDGSARFMWNNGFYMIWRHIKDLYKEDIEFGLQLLPHLKSDH
IYLNSYSLMRVKLATQILSETTSAALSVSGPKEAKGTANFCLQFDKFFDC
FNVQFKRKHITSRKPFLKPYTADSEDEKEIERWKFLNDFLQYLKDWRKSI
DERPGDFTPTQRNNMFLSQPTYEGIQMSINSLKEIVPYLLGQGFEYVLTE
KFCQDDLENYFGRQRAIGARNDAPNVKQVLSNDSYIKNGFENGPIRGSNC
EK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025329XLOC_025329Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041344TCONS_00041344Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021896Transposase_37
Vocabulary: Molecular Function
TermDefinition
GO:0004803transposase activity
Vocabulary: Biological Process
TermDefinition
GO:0006313transposition, DNA-mediated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0004803 transposase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021896Transposase proteinPFAMPF12017Tnp_P_elementcoord: 5..206
e-value: 1.2E-5
score: 24.8

Blast
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BLAST of TCONS_00041344-protein vs. Swiss-Prot (Human)
Match: THAP9 (DNA transposase THAP9 OS=Homo sapiens GN=THAP9 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.398e-18
Identity = 93/342 (27.19%), Postives = 167/342 (48.83%), Query Frame = 0 
Query:   22 YHPDIIKFCLSISAKSSAAYDQLRLNSKDGSGILVLPSQRTLRNYRNHIKPQQGFDPKIVADLTERTKKFSEREKFISVVIDEMKVQEDLVWDRSTGKLIGFLD--LGDTAINESTISNETKLATHVMVFLVKSVMNPLSFSFATFATDTASSAQIYSLFWKCVSILEISCQLKVIATVADGASTNRRFAK---MNRDQDDVKCSEVVYRTINVYAPERYIYFFADAPHLIKTSRNCLWKSGQDGSARFMWNNGFYMIWRHIKDLYKEDIEFGLQLLPHLKSDHIYLNSYSLMRVKLATQILSETTSAA----LSVSGP--KEAKGTANFCLQFDKFFDCFN 352
            Y  ++ +F  ++   SS  YD +R        IL LP    LR + +  +P  GF+  I + L  R +   +  ++ S++I  M +++ L WD S+  L GF+D  LG    +E+ +++ET L   V +F       PL + F   A+     AQ+  L    +S + I+    V+A  +D  + + + AK   ++ D DD+KC+       +  +  + I +F D+ HL++  RN  +++ Q  S +F+  NG    W+H+ +L   + E  L  +  + S    L ++ +++V  ATQ+ SE+ ++A    LS+  P  +   GT +F    +  FD FN
Sbjct:  208 YSAEMKQFACTLYLCSSKVYDYVR-------KILKLPHSSILRTWLSKCQPSPGFNSNIFSFLQRRVENGDQLYQYCSLLIKSMPLKQQLQWDPSSHSLQGFMDFGLGKLDADETPLASETVLLMAVGIF--GHWRTPLGYFFVNRASGYL-QAQLLRLTIGKLSDIGIT----VLAVTSDATAHSVQMAKALGIHIDGDDMKCT-----FQHPSSSSQQIAYFFDSCHLLRLIRNA-FQNFQ--SIQFI--NGIAH-WQHLVELVALE-EQELSNMERIPSTLANLKNH-VLKVNSATQLFSESVASALEYLLSLDLPPFQNCIGTIHFLRLINNLFDIFN 522
The following BLAST results are available for this feature:
BLAST of TCONS_00041344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THAP91.398e-1827.19DNA transposase THAP9 OS=Homo sapiens GN=THAP9 PE=... [more]
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