TCONS_00040789-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040789-protein
Unique NameTCONS_00040789-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040789-protein ID=TCONS_00040789-protein|Name=TCONS_00040789-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
MKKAEIWICKNLGCNKQFKHRQSLQNHKLNCGLSSSVKCPVCFKSFARSW
YLKSHKCKQKESLECSQCSKVFPKVWHLKRHIKNVHAKLKKELKCSTCER
QFSRQDFYDKHKCSGGGNKDTNENIEKKQGYFNFEETECDDNLNEMVQWS
FNNFTH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024863XLOC_024863Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040789TCONS_00040789Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 7..29
e-value: 21.0
score: 10.5
coord: 63..86
e-value: 9.2E-4
score: 28.5
coord: 37..57
e-value: 140.0
score: 3.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 65..86
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 63..91
score: 11.344
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 64..112
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 37..72
NoneNo IPR availableGENE3D3.30.160.60coord: 25..48
e-value: 7.4E-6
score: 25.4
NoneNo IPR availableGENE3D3.30.160.60coord: 7..24
e-value: 0.029
score: 13.9
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 64..86
e-value: 3.9E-4
score: 20.9
NoneNo IPR availableGENE3D3.30.160.60coord: 49..77
e-value: 2.8E-9
score: 36.7
coord: 78..122
e-value: 2.7E-6
score: 27.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 38..57
e-value: 0.0091
score: 16.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040789-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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