TCONS_00040742-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040742-protein
Unique NameTCONS_00040742-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040742-protein ID=TCONS_00040742-protein|Name=TCONS_00040742-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
KNILVTGCDSGFGLQTAWELSESNCHVFASCLTQNGVDRLQNDSKFQGMA
FIMDVTKEDDVQKAKEIIEQNGDLDGIVNNAGIAFPALFEWQSIEFMKKT
FEVNFWGTVRVAKVMLPLLKKSRGRIVNLTSMT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024823XLOC_024823Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040742TCONS_00040742Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 2..19
score: 36.07
coord: 118..133
score: 31.2
coord: 72..83
score: 56.98
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 1..132
e-value: 3.1E-25
score: 88.7
NoneNo IPR availableGENE3D3.40.50.720coord: 1..133
e-value: 3.5E-31
score: 108.0
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..132

Blast
[Close]
BLAST of TCONS_00040742-protein vs. Swiss-Prot (Human)
Match: H17B6 (17-beta-hydroxysteroid dehydrogenase type 6 OS=Homo sapiens GN=HSD17B6 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.485e-24
Identity = 53/136 (38.97%), Postives = 83/136 (61.03%), Query Frame = 0 
Query:    1 KNILVTGCDSGFGLQTAWELSESNCHVFASCLTQNGVDRLQNDSKFQGMAFIMDVTKEDDVQKAKEIIEQN-GD--LDGIVNNAGIAFP-ALFEWQSIEFMKKTFEVNFWGTVRVAKVMLPLLKKSRGRIVNLTSM 132
            K + +TGCDSGFG   A +L      V A+CLT+ G ++L+  +  +     +DVTK + +  A + ++++ GD  L G+VNNAGI  P  L EW + E      +VN  G ++V   MLPL++++RGRIVN++S+
Sbjct:   30 KYVFITGCDSGFGNLLARQLDARGLRVLAACLTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVGDRGLWGLVNNAGILTPITLCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRARGRIVNVSSI 165
The following BLAST results are available for this feature:
BLAST of TCONS_00040742-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
H17B61.485e-2438.9717-beta-hydroxysteroid dehydrogenase type 6 OS=Hom... [more]
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